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TRANSCRIPT CARD

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  1. Region 'REG00000685' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  3. > 
  4. Clone 'citb035f09' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1645.g15328.03.t

Possible name(s)

SNW1

Gene model

Phmamm.CG.MTP2014.S1645.g15328

Location

S1645 [14,326 / 20,377]

Sequences

Amino acid sequence

Length: 519

>Phmamm.CG.MTP2014.S1645.g15328.03.p
PEPTQVTYDQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGGAFPEIPVVQFP
LGMGKTKKKKEALAVQLDSEGKIRYDAIARQGHSKDRIVHSKFQQLVPKEILDEDDPDLQ
RPDEDAIREQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPSQQGVAFNSGAK
QRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQQDWKVPPCISN
WKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMRAQVERKVA
SKEKEAKERQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHERHRDRQRERNLARAAP
EKRNRLREERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGGDDEGYNVYDKP
WRSETQVGSSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPSQSREGPVQFEK
DEDLFGLNKFMEQAKQARKRPTEASTSKSSHDKSKRKRE

Nucleotide sequence

Length: 1,965

>Phmamm.CG.MTP2014.S1645.g15328.03.t
TGCCAGAACCAACACAGGTAACTTATGACCAGTTGGATCCAATTCAACCTACATCCAAAG
CTGTGATTTCTATGAGATATGAGCCACCTCCATATGGACACAGAAAAGGTTTCATTCCAC
GTGCCGAGCGTGATTTTGGCGATGGTGGTGCATTTCCAGAAATTCCAGTTGTTCAATTTC
CTTTGGGAATGGGGAAAACTAAAAAGAAGAAAGAGGCACTTGCTGTACAACTCGATTCTG
AAGGAAAGATTCGTTATGATGCCATTGCACGTCAAGGTCACAGCAAGGACAGAATAGTAC
ACAGTAAGTTTCAACAACTTGTCCCAAAAGAGATTCTGGATGAAGATGACCCGGATCTTC
AGCGACCTGATGAGGATGCTATAAGAGAGCAAACTGAATCAACCCGGCAAGCTTTGGAAA
AATTAACAAATGAGAAAATAACAGCTGCAATGCCAGTAAAAAGAGCAGAGCAGCGTGCTC
CTGCACAATATATCAGATATACACCATCACAGCAAGGAGTTGCATTCAACTCTGGGGCCA
AACAACGTGTTATTCGAATGGTTGAGATGCAGAAAGATCCAATGGAACCTCCCAAATTTA
AAACAAACAAAAAGTTGCCACAAGGTCCACCAAGCCCTCCAGCCCCAGTAATGCATTCAC
CCAACCGAAAGTTGTCTGTAAAGGAGCAGCAAGACTGGAAAGTTCCTCCCTGTATTTCAA
ACTGGAAAAATGCAAAGGGTCACACAATACCACTGGATAAACGTCTTGCAGCAGATGGTC
GTGGATTACAGAGTGTCCACATCAACGAAAATTTTGCCAAGTTGGCCGAAGCACTATACA
TAGCTGATAGAAAGGCCAGAGAGGCTGTTGAAATGAGAGCACAAGTGGAAAGGAAAGTTG
CATCAAAAGAGAAAGAAGCCAAGGAGCGACAACTTCGTCAACTTGCTGAAGAGGCTAGAA
ATAAACGAGCTGGCATAAAGAAGGATGATAGAGATGATAAGGAGGTGAAAGAAAGAGATG
AAATAAGACATGAAAGACACCGGGACCGCCAAAGAGAAAGAAATCTTGCACGGGCTGCTC
CCGAAAAGAGGAATCGTCTTCGTGAGGAGCGTGATATCAGTGAAAAGATTGCACTTGGAT
TGCCAAACACAAGGACTGCTCAGGAGGCACAATTTGATCAGAGACTTTTCAATAAAAGCA
GGGGAATGGACAGTGGTTTTGATGGTGGTGATGATGAAGGTTACAATGTTTATGACAAAC
CATGGAGATCCGAGACACAGGTTGGAAGTAGCATCTATAGACCTACTAAAGACAAAGACA
AGGAAATGTATGGAGATGATGACATCGACAAGCTAATCAAAAGCAACAGGTTTGTCCCTG
ACAAAGGATTTAAAGGAGCAGATCCTTCACAAAGTAGGGAAGGTCCTGTTCAGTTTGAAA
AAGATGAGGATCTGTTTGGTTTGAACAAATTCATGGAACAAGCCAAACAGGCTCGCAAGC
GACCAACGGAGGCGTCGACCAGCAAATCGTCACACGACAAAAGCAAACGAAAGAGGGAGT
GAATTGAAACAGCCATATATGCGTCACTGCCCTTCCCTGACACTCCTGTTGCTACTGGCT
TTGCAGTCTTGTACATTGTTGACGATTAATTATGGCGTTTTTCCAGCCCACACTTATGGT
GGAAATGTGTGTGACAAGTGCCACCTTTGCTGCTGACATTTGACACGTGTCACATGGGCT
TGTCAATGCGATATGTCGCTTTACTGAAGTTGACACTTGCGTGTTAGTGCACTAAAATTT
TGTCATCGACTTGTGCCACTTGCAAAGTACCGCTGAAAGTTATTTGATATTTTTGGTGAA
CATTCATCGCGAATTTTTTTAATAACTGAAGCTTATGTCCAAAACTATTAATGCCTTTTT
AACGCCTCTATTTGGGATTTGCGATTTTGTAGGTGTTGGCGGTTT

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[1-513] 7.3E-230
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[162-322] 1.0E-71

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 67.105 % 684 0