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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Molecular Tool 'ZicL- MO (Yagi's 25mer MO)' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1645.g15328.02.t

Possible name(s)

SNW1

Gene model

Phmamm.CG.MTP2014.S1645.g15328

Location

S1645 [14,321 / 20,336]

Sequences

Amino acid sequence

Length: 506

>Phmamm.CG.MTP2014.S1645.g15328.02.p
IQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGGAFPEIPVVQFPLGMGKTKKKKEAL
AVQLDSEGKIRYDAIARQGHSKDRIVHSKFQQLVPKEILDEDDPDLQRPDEDAIREQTES
TRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDP
MEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQQDWKVPPCISNWKNAKGHTIPLDK
RLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMRAQVERKVASKEKEAKERQLRQ
LAEEARNKRAGIKKDDRDDKEVKERDEIRHERHRDRQRERNLARAAPEKRNRLREERDIS
EKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGGDDEGYNVYDKPWRSETQVGSSIYR
PTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPSQSREGPVQFEKDEDLFGLNKFMEQ
AKQARKRPTEASTSKSSHDKSKRKRE

Nucleotide sequence

Length: 1,929

>Phmamm.CG.MTP2014.S1645.g15328.02.t
ATTCAACCTACATCCAAAGCTGTGATTTCTATGAGATATGAGCCACCTCCATATGGACAC
AGAAAAGGTTTCATTCCACGTGCCGAGCGTGATTTTGGCGATGGTGGTGCATTTCCAGAA
ATTCCAGTTGTTCAATTTCCTTTGGGAATGGGGAAAACTAAAAAGAAGAAAGAGGCACTT
GCTGTACAACTCGATTCTGAAGGAAAGATTCGTTATGATGCCATTGCACGTCAAGGTCAC
AGCAAGGACAGAATAGTACACAGTAAGTTTCAACAACTTGTCCCAAAAGAGATTCTGGAT
GAAGATGACCCGGATCTTCAGCGACCTGATGAGGATGCTATAAGAGAGCAAACTGAATCA
ACCCGGCAAGCTTTGGAAAAATTAACAAATGAGAAAATAACAGCTGCAATGCCAGTAAAA
AGAGCAGAGCAGCGTGCTCCTGCACAATATATCAGATATACACCATCACAGCAAGGAGTT
GCATTCAACTCTGGGGCCAAACAACGTGTTATTCGAATGGTTGAGATGCAGAAAGATCCA
ATGGAACCTCCCAAATTTAAAACAAACAAAAAGTTGCCACAAGGTCCACCAAGCCCTCCA
GCCCCAGTAATGCATTCACCCAACCGAAAGTTGTCTGTAAAGGAGCAGCAAGACTGGAAA
GTTCCTCCCTGTATTTCAAACTGGAAAAATGCAAAGGGTCACACAATACCACTGGATAAA
CGTCTTGCAGCAGATGGTCGTGGATTACAGAGTGTCCACATCAACGAAAATTTTGCCAAG
TTGGCCGAAGCACTATACATAGCTGATAGAAAGGCCAGAGAGGCTGTTGAAATGAGAGCA
CAAGTGGAAAGGAAAGTTGCATCAAAAGAGAAAGAAGCCAAGGAGCGACAACTTCGTCAA
CTTGCTGAAGAGGCTAGAAATAAACGAGCTGGCATAAAGAAGGATGATAGAGATGATAAG
GAGGTGAAAGAAAGAGATGAAATAAGACATGAAAGACACCGGGACCGCCAAAGAGAAAGA
AATCTTGCACGGGCTGCTCCCGAAAAGAGGAATCGTCTTCGTGAGGAGCGTGATATCAGT
GAAAAGATTGCACTTGGATTGCCAAACACAAGGACTGCTCAGGAGGCACAATTTGATCAG
AGACTTTTCAATAAAAGCAGGGGAATGGACAGTGGTTTTGATGGTGGTGATGATGAAGGT
TACAATGTTTATGACAAACCATGGAGATCCGAGACACAGGTTGGAAGTAGCATCTATAGA
CCTACTAAAGACAAAGACAAGGAAATGTATGGAGATGATGACATCGACAAGCTAATCAAA
AGCAACAGGTTTGTCCCTGACAAAGGATTTAAAGGAGCAGATCCTTCACAAAGTAGGGAA
GGTCCTGTTCAGTTTGAAAAAGATGAGGATCTGTTTGGTTTGAACAAATTCATGGAACAA
GCCAAACAGGCTCGCAAGCGACCAACGGAGGCGTCGACCAGCAAATCGTCACACGACAAA
AGCAAACGAAAGAGGGAGTGAATTGAAACAGCCATATATGCGTCACTGCCCTTCCCTGAC
ACTCCTGTTGCTACTGGCTTTGCAGTCTTGTACATTGTTGACGATTAATTATGGCGTTTT
TCCAGCCCACACTTATGGTGGAAATGTGTGTGACAAGTGCCACCTTTGCTGCTGACATTT
GACACGTGTCACATGGGCTTGTCAATGCGATATGTCGCTTTACTGAAGTTGACACTTGCG
TGTTAGTGCACTAAAATTTTGTCATCGACTTGTGCCACTTGCAAAGTACCGCTGAAAGTT
ATTTGATATTTTTGGTGAACATTCATCGCGAATTTTTTTAATAACTGAAGCTTATGTCCA
AAACTATTAATGCCTTTTTAACGCCTCTATTTGGGATTTGCGATTTTGTAGGTGTTGGCG
GTTTTCGAA

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[5-500] 3.0E-229
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[149-309] 1.0E-71

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 69.034 % 677 0