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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.454.v1....' > 
  2. Transcript 'Moocci.CG.ELv1_2.S25...' > 
  3. Region 'REG00001190' > 
  4. Clone 'AHC2BAA17YD22' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1645.g15328.01.t

Possible name(s)

SNW1

Gene model

Phmamm.CG.MTP2014.S1645.g15328

Location

S1645 [14,285 / 20,635]

Sequences

Amino acid sequence

Length: 531

>Phmamm.CG.MTP2014.S1645.g15328.01.p
RNKNMATLSSLLPEPTQVTYDQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDG
GAFPEIPVVQFPLGMGKTKKKKEALAVQLDSEGKIRYDAIARQGHSKDRIVHSKFQQLVP
KEILDEDDPDLQRPDEDAIREQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTP
SQQGVAFNSGAKQRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKE
QQDWKVPPCISNWKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREA
VEMRAQVERKVASKEKEAKERQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHERHRD
RQRERNLARAAPEKRNRLREERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDG
GDDEGYNVYDKPWRSETQVGSSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADP
SQSREGPVQFEKDEDLFGLNKFMEQAKQARKRPTEASTSKSSHDKSKRKRE

Nucleotide sequence

Length: 2,041

>Phmamm.CG.MTP2014.S1645.g15328.01.t
AAGAAACAAAAACATGGCAACTTTGTCTAGTTTGTTGCCAGAACCAACACAGGTAACTTA
TGACCAGTTGGATCCAATTCAACCTACATCCAAAGCTGTGATTTCTATGAGATATGAGCC
ACCTCCATATGGACACAGAAAAGGTTTCATTCCACGTGCCGAGCGTGATTTTGGCGATGG
TGGTGCATTTCCAGAAATTCCAGTTGTTCAATTTCCTTTGGGAATGGGGAAAACTAAAAA
GAAGAAAGAGGCACTTGCTGTACAACTCGATTCTGAAGGAAAGATTCGTTATGATGCCAT
TGCACGTCAAGGTCACAGCAAGGACAGAATAGTACACAGTAAGTTTCAACAACTTGTCCC
AAAAGAGATTCTGGATGAAGATGACCCGGATCTTCAGCGACCTGATGAGGATGCTATAAG
AGAGCAAACTGAATCAACCCGGCAAGCTTTGGAAAAATTAACAAATGAGAAAATAACAGC
TGCAATGCCAGTAAAAAGAGCAGAGCAGCGTGCTCCTGCACAATATATCAGATATACACC
ATCACAGCAAGGAGTTGCATTCAACTCTGGGGCCAAACAACGTGTTATTCGAATGGTTGA
GATGCAGAAAGATCCAATGGAACCTCCCAAATTTAAAACAAACAAAAAGTTGCCACAAGG
TCCACCAAGCCCTCCAGCCCCAGTAATGCATTCACCCAACCGAAAGTTGTCTGTAAAGGA
GCAGCAAGACTGGAAAGTTCCTCCCTGTATTTCAAACTGGAAAAATGCAAAGGGTCACAC
AATACCACTGGATAAACGTCTTGCAGCAGATGGTCGTGGATTACAGAGTGTCCACATCAA
CGAAAATTTTGCCAAGTTGGCCGAAGCACTATACATAGCTGATAGAAAGGCCAGAGAGGC
TGTTGAAATGAGAGCACAAGTGGAAAGGAAAGTTGCATCAAAAGAGAAAGAAGCCAAGGA
GCGACAACTTCGTCAACTTGCTGAAGAGGCTAGAAATAAACGAGCTGGCATAAAGAAGGA
TGATAGAGATGATAAGGAGGTGAAAGAAAGAGATGAAATAAGACATGAAAGACACCGGGA
CCGCCAAAGAGAAAGAAATCTTGCACGGGCTGCTCCCGAAAAGAGGAATCGTCTTCGTGA
GGAGCGTGATATCAGTGAAAAGATTGCACTTGGATTGCCAAACACAAGGACTGCTCAGGA
GGCACAATTTGATCAGAGACTTTTCAATAAAAGCAGGGGAATGGACAGTGGTTTTGATGG
TGGTGATGATGAAGGTTACAATGTTTATGACAAACCATGGAGATCCGAGACACAGGTTGG
AAGTAGCATCTATAGACCTACTAAAGACAAAGACAAGGAAATGTATGGAGATGATGACAT
CGACAAGCTAATCAAAAGCAACAGGTTTGTCCCTGACAAAGGATTTAAAGGAGCAGATCC
TTCACAAAGTAGGGAAGGTCCTGTTCAGTTTGAAAAAGATGAGGATCTGTTTGGTTTGAA
CAAATTCATGGAACAAGCCAAACAGGCTCGCAAGCGACCAACGGAGGCGTCGACCAGCAA
ATCGTCACACGACAAAAGCAAACGAAAGAGGGAGTGAATTGAAACAGCCATATATGCGTC
ACTGCCCTTCCCTGACACTCCTGTTGCTACTGGCTTTGCAGTCTTGTACATTGTTGACGA
TTAATTATGGCGTTTTTCCAGCCCACACTTATGGTGGAAATGTGTGTGACAAGTGCCACC
TTTGCTGCTGACATTTGACACGTGTCACATGGGCTTGTCAATGCGATATGTCGCTTTACT
GAAGTTGACACTTGCGTGTTAGTGCACTAAAATTTTGTCATCGACTTGTGCCACTTGCAA
AGTACCGCTGAAAGTTATTTGATATTTTTGGTGAACATTCATCGCGAATTTTTTTAATAA
CTGAAGCTTATGTCCAAAACTATTAATGCCTTTTTAACGCCTCTATTTGGGATTTGCGAT
TTTGTAGGTGTTGGCGGTTTTCGAATGCTCGAATGTAAATGGTTTGAATTGTTGAGCGAA
C

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[5-525] 3.8E-233
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[174-334] 1.1E-71

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 66.914 % 691 0