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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'
  2. Transcript 'Phmamm.CG.MTP2014.S4...'
  3. Transcript 'KH2012:KH.C7.696.v1....'
  4. Transcript 'Haaura.CG.MTP2014.S1...'
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1629.g15287.01.t

Possible name(s)

NLRC5; NLRP13; NLRP3

Location

S1629 [5,836 / 8,419]

Sequences

Amino acid sequence

Length: 664

>Phmamm.CG.MTP2014.S1629.g15287.01.p
MSAKKQCSSKNFLKLTRQKIEICPMEITDKPSRKIQPAEYQTPRKQRKLQTSKKWEEEGH
YNRRKDYEKIDLKEKNEVSVESLFCLAEQQASKNGESECQGNVVALIGQPGIGKTTLSKV
ITENILQDKKENITNIDWAFYISVKNINFQKEVTLVDFLLKYSLQNNQYNKLNDEGFISL
QERILKEILDSNNVYLAFDGLDEASAEWDLEYKGGLNLREKNNPLVYLFGLMNGDILPDA
KKLFTSRQNHFFSINANHRPSFVAEVLGLNTKSQESLCKQICPDHKDQVWKIIESNPNLS
YSCYVPAKCVFITFAVWKSLKEDSSNRFHSLTHIFAQGFKYYFADGFVKGKVKDEKYMDK
IAKLAWNGFKKKTTIFEKRDLDKVGIDMKTFIDILSAFVTEENWGLEILDCDKKSNFSHL
IWQEYFAACYLVYFSSVDEFRKLIPQFKSNRWEVVTKFVFGLFNSDVSEVGKICFLTTNQ
NEQEFQDKKAELLKLACNEMKVRVKNTKVMSRVKLVQVCSWLQEIDDEKFYEEVALSLPA
QINLTGNILLTDISSITNVLGHSETKHSIYIAKSSKLIHCDMYDFLQNIMKHNVEMTTLL
VAGDPLDEKAETCLLDYMKNITSSLFMYKSHISADFQSKYFRLPQPVYTVSQMVSKGSNS
LVYN

Nucleotide sequence

Length: 1,995

>Phmamm.CG.MTP2014.S1629.g15287.01.t
ATGTCAGCTAAAAAGCAATGCTCATCAAAAAACTTTTTGAAATTGACGAGGCAGAAAATT
GAGATTTGTCCGATGGAAATAACAGACAAACCAAGCAGAAAAATTCAACCAGCTGAATAT
CAGACACCAAGAAAACAGAGAAAACTACAAACATCAAAAAAATGGGAAGAGGAGGGACAT
TACAACAGAAGAAAAGATTATGAGAAGATCGATTTAAAGGAGAAAAATGAAGTTTCAGTT
GAAAGTCTATTTTGTTTAGCTGAACAGCAAGCAAGTAAAAATGGTGAATCTGAATGCCAA
GGAAATGTGGTTGCCCTGATTGGACAGCCAGGAATCGGAAAAACAACACTTTCCAAAGTT
ATTACTGAGAATATACTTCAGGATAAGAAGGAAAACATAACAAATATTGATTGGGCTTTT
TACATTTCTGTCAAAAATATAAACTTTCAAAAAGAAGTAACACTGGTTGATTTTCTGTTA
AAATATTCACTACAAAACAACCAATACAACAAGTTAAATGATGAAGGATTCATTTCTTTA
CAAGAAAGAATACTTAAAGAAATTTTAGACTCCAACAATGTATACCTTGCTTTTGATGGC
CTCGATGAAGCTTCAGCAGAATGGGATTTAGAGTATAAAGGTGGTTTGAACTTGCGAGAA
AAAAACAACCCTTTGGTCTATTTATTTGGTCTTATGAATGGAGACATACTACCTGATGCA
AAAAAGCTTTTTACATCTCGACAAAACCATTTTTTCTCGATTAATGCAAATCATCGGCCA
TCATTTGTGGCTGAAGTTTTGGGTTTAAATACAAAATCTCAAGAGAGTTTGTGTAAACAG
ATTTGCCCTGACCATAAAGATCAAGTGTGGAAAATCATCGAAAGCAACCCAAACTTATCT
TACTCATGTTATGTGCCAGCTAAATGTGTGTTTATTACATTTGCTGTTTGGAAAAGTCTT
AAGGAGGATTCTAGTAATCGATTTCACTCCCTTACTCATATTTTTGCACAAGGGTTTAAG
TATTATTTTGCTGATGGATTTGTAAAGGGAAAAGTAAAAGATGAAAAATACATGGATAAA
ATTGCCAAGTTGGCATGGAATGGATTTAAGAAAAAAACAACTATCTTTGAAAAGCGAGAT
CTGGACAAAGTGGGGATTGACATGAAAACATTTATTGACATACTTTCAGCTTTTGTAACA
GAAGAAAATTGGGGACTGGAAATTCTTGACTGTGACAAAAAGAGCAACTTTTCACATTTA
ATTTGGCAAGAGTATTTTGCTGCTTGCTACCTCGTTTACTTCTCAAGTGTTGATGAGTTT
CGTAAATTGATTCCTCAGTTTAAAAGTAACAGATGGGAGGTAGTTACCAAGTTTGTGTTT
GGTCTTTTTAACTCTGATGTCAGTGAAGTTGGTAAAATTTGTTTTTTGACAACAAATCAA
AATGAACAAGAATTCCAGGATAAAAAAGCAGAATTACTGAAACTTGCTTGTAATGAGATG
AAAGTAAGAGTAAAAAACACTAAAGTCATGAGCAGGGTAAAGCTGGTGCAAGTCTGCTCA
TGGTTGCAAGAAATTGATGATGAAAAATTTTACGAAGAAGTTGCCCTATCTCTTCCCGCG
CAGATAAATTTAACTGGCAACATACTTTTGACTGATATCTCAAGCATTACAAATGTGTTA
GGTCATTCTGAAACGAAGCATAGCATTTATATTGCAAAATCATCCAAATTGATTCATTGT
GACATGTACGATTTTCTTCAAAATATAATGAAACATAATGTGGAGATGACAACACTTTTA
GTTGCTGGTGACCCACTTGATGAAAAAGCAGAAACCTGTTTGTTAGATTACATGAAGAAC
ATAACATCTTCGCTTTTTATGTACAAATCACACATAAGTGCAGACTTTCAATCAAAATAT
TTCAGATTACCTCAACCAGTGTACACTGTCAGTCAGATGGTGTCCAAAGGGAGCAACTCA
CTTGTTTATAATTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[100-289] 3.49E-9
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[102-247] 14.013
Pfam
NACHT_NTPase (IPR007111) - T[103-279] 7.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value