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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'Moocci.CG.ELv1_2.S29...'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1622.g15270.01.t

Possible name(s)

Phmamm.CG.MTP2014.S1622.g15270

Location

S1622 [14,738 / 22,326]

Sequences

Amino acid sequence

Length: 1,229

>Phmamm.CG.MTP2014.S1622.g15270.01.p
MDEQQETVATETVEQTAQEGPDSSIFTETNLSEQVEETAAVKPEEDNEDKKSEPVEAEPT
KEEDGVKEVTPPPPIFTETNLSEQVEETAEVKPEEDNEDKKLEPVEAEPTKEEDGVKEVT
PEVPEDMLVEPTIENTTVDQLIAESEIVNPVENMAVSEEGTPTEVVEATTNETQVEDQDL
PAAEKVDVPKPKPKSGTFSLGVPGLTFSSQNLKVANDGTKMVQIHQSQITPDQLQALQSN
PNIKVVFRHIPTGKSFTKPPKNLFSCLSKQQGVKRKSSSDHGNDDSIYNFDDDFDRDYTD
TRPKGSISKYARYTPNIGMKKRGPGRPRLIPDAHTVTGGLTIKPKPPAIPTQIMLTDALS
KLNNPRASNTVKIHIKQVTHDILANMELNPDYNLVLTAKHDLPPEHSLEELVKEWEEKEV
EQQIEHTEEKEMDTLIQDETPMEEAIMEEDFIRDEPRVKFTESEEDEQLLAEQQRLKEEQ
KEREEAELLAAAMQEKKSRSGRIRKPSRYSLDIARLTKRRNAADDETPDEDFVVTPPKPV
FVKTPKSDVSTPGVKKRGRGRPKKVRLEEDSTPTASSMDDNEVKAKVVLAAASPEHKKAE
PMVLMSPSDKKLAETIRLKDQPEPDADSDTKTDDTKTNSSTENKVSDVQEADSDAQIKDQ
DDSKTPDMEAKTDEPTKQDEKMDVSDSKTKADDKTTDTETNIVEESDTADKKVADENQVV
ESDTTKDMETEKSEDSKDAEKPTEEKQVEESIENKETSLTDDVTEKKTEETNETSQPERK
VSSEGETPSDVIARKLSAQGEGDQPDQPTVMKEKTEQKTELKDFVEEEGDVDNKYRLRKL
LQQCTIDEIRSVAIPRALDAITIGDFFLHKAGQMSTEKVKFASLYKQLENLHTAIEKESV
RYNTLLRRANKVGGDRRMDKVILMPIYNKKAAESIHISSSSIDAHIGGINQKSTAQMIAA
NSFRMNCKMEPPVHRLKLPDLADKNQFRNKRRQLQHKYNRQPEPDSTTPDHPNQRNLGRL
PGNLHANNWKKSPYQVRKPSYLLGSGTGGAAHSTLQEQARMQLVGRYQSQLVVSKDPTPV
STSVVDSSTSVLTTDNANLVSQSSEVTSAGNVIDLNQDLLTSQQVVDGQAAQVVNEDGSP
AIAAEEGKQLVAIGDGQYVELPEGYTLIQTDDGYIIGQPGATFVQGEDGNVYMTSTEDGT
EANTQVLTTTAPIGETASTDALLDQLGQT

Nucleotide sequence

Length: 3,690

>Phmamm.CG.MTP2014.S1622.g15270.01.t
ATGGACGAGCAACAAGAAACAGTTGCAACTGAAACTGTTGAACAAACTGCTCAAGAAGGT
CCGGATTCATCTATTTTTACTGAAACTAACCTAAGTGAACAAGTTGAAGAAACAGCTGCA
GTTAAACCAGAGGAAGATAATGAAGATAAAAAATCGGAACCAGTTGAAGCCGAACCCACC
AAGGAAGAGGATGGTGTCAAGGAAGTAACACCCCCCCCCCCTATTTTTACTGAAACTAAC
CTAAGTGAACAAGTTGAAGAAACAGCTGAAGTTAAACCAGAGGAAGATAATGAAGATAAA
AAATTGGAACCAGTTGAAGCCGAACCCACTAAGGAAGAGGATGGTGTCAAGGAAGTAACG
CCAGAAGTACCAGAGGATATGCTGGTTGAACCCACAATTGAAAATACTACAGTGGACCAA
TTAATTGCAGAGTCTGAAATTGTGAATCCAGTTGAAAATATGGCAGTTAGCGAGGAGGGC
ACTCCAACAGAGGTAGTTGAAGCTACCACAAATGAAACCCAAGTAGAAGATCAAGATTTG
CCGGCTGCTGAAAAAGTCGATGTCCCAAAACCAAAACCTAAGTCAGGAACATTTAGTCTT
GGAGTCCCAGGACTTACTTTCTCATCACAAAACTTGAAAGTAGCAAATGATGGCACAAAA
ATGGTACAAATCCATCAGTCTCAAATTACGCCAGATCAGCTGCAAGCTCTGCAATCTAAT
CCCAACATTAAGGTGGTGTTTCGTCACATCCCGACAGGAAAGAGTTTTACAAAACCTCCA
AAAAATCTGTTCAGTTGTTTGTCCAAACAACAGGGAGTTAAACGGAAAAGTAGCAGTGAT
CATGGCAATGATGATTCGATTTATAACTTTGATGATGACTTTGACAGAGATTATACAGAC
ACCAGACCTAAAGGAAGCATTTCAAAATATGCAAGATATACACCAAATATTGGAATGAAA
AAGAGAGGTCCAGGAAGGCCAAGACTGATTCCAGATGCTCACACTGTCACCGGTGGGCTA
ACCATAAAACCTAAGCCACCTGCAATTCCTACACAAATAATGTTGACAGATGCACTCAGT
AAACTGAACAACCCAAGAGCTTCAAATACAGTAAAAATTCATATTAAACAAGTAACACAT
GACATATTGGCAAACATGGAGTTGAATCCTGATTACAACTTGGTTCTTACTGCTAAACAT
GATTTACCACCGGAACACAGTTTAGAGGAGCTGGTAAAAGAATGGGAAGAGAAAGAGGTG
GAGCAACAAATAGAACATACGGAGGAAAAGGAGATGGACACATTGATCCAAGATGAAACT
CCCATGGAGGAAGCAATAATGGAAGAGGATTTCATTAGAGATGAACCCAGAGTTAAGTTT
ACTGAAAGTGAGGAGGATGAGCAGTTATTGGCAGAACAACAGCGTCTAAAAGAAGAACAA
AAAGAGAGAGAAGAAGCAGAGCTTTTAGCTGCTGCGATGCAAGAGAAAAAATCCAGATCT
GGAAGAATTAGAAAACCTTCAAGGTATAGCTTGGACATTGCTCGCCTCACCAAACGCCGA
AATGCAGCAGATGATGAAACACCGGATGAAGATTTTGTTGTTACTCCACCAAAACCAGTA
TTTGTTAAAACACCAAAATCAGATGTATCGACTCCAGGTGTTAAGAAACGTGGTCGGGGA
AGACCAAAGAAAGTAAGACTGGAAGAGGATTCTACTCCAACTGCCTCATCTATGGACGAC
AATGAAGTAAAGGCTAAAGTGGTTTTAGCAGCTGCTAGTCCTGAACATAAAAAAGCAGAA
CCCATGGTCTTAATGTCACCTTCAGACAAGAAGTTGGCTGAGACCATTAGGTTAAAGGAT
CAACCTGAGCCTGATGCTGATTCAGATACAAAAACTGATGACACAAAGACTAACTCTTCA
ACTGAAAATAAAGTAAGCGATGTTCAAGAAGCAGACAGTGATGCCCAAATAAAAGATCAA
GATGACAGCAAAACACCAGACATGGAAGCGAAAACTGATGAACCTACTAAACAAGATGAA
AAAATGGATGTTAGTGACTCCAAAACAAAAGCTGATGACAAAACCACAGACACAGAAACT
AATATAGTGGAAGAATCAGATACTGCTGATAAAAAAGTAGCAGATGAAAATCAAGTGGTT
GAATCTGACACTACAAAGGACATGGAAACTGAAAAATCTGAAGATTCAAAAGATGCTGAA
AAACCTACTGAAGAAAAACAAGTGGAAGAGTCTATTGAGAACAAAGAAACTAGTTTGACA
GATGATGTAACTGAAAAAAAGACTGAAGAAACAAATGAAACATCACAACCTGAAAGGAAA
GTATCATCAGAAGGTGAAACACCCTCGGATGTGATTGCAAGAAAACTTTCAGCTCAAGGG
GAGGGTGATCAACCAGATCAGCCCACTGTTATGAAGGAAAAGACTGAACAAAAAACAGAG
CTTAAAGATTTTGTGGAAGAAGAAGGAGATGTGGATAACAAATACAGGCTGCGAAAACTA
CTTCAGCAGTGTACAATTGATGAAATTCGAAGTGTGGCTATTCCTCGTGCTCTTGATGCC
ATTACTATTGGCGATTTCTTTCTGCACAAGGCTGGTCAAATGTCTACCGAGAAAGTGAAA
TTTGCATCACTTTACAAGCAACTGGAAAATCTTCACACTGCCATTGAAAAAGAATCTGTT
CGTTACAACACCCTGCTTCGAAGAGCCAATAAAGTTGGAGGTGACAGGAGAATGGATAAG
GTTATTCTTATGCCAATCTACAACAAAAAGGCTGCTGAAAGTATTCACATTAGTAGCAGT
AGCATAGATGCTCATATTGGTGGAATAAATCAAAAGAGTACTGCCCAAATGATTGCTGCT
AACTCCTTTAGAATGAATTGTAAAATGGAACCACCTGTGCATAGGCTCAAATTGCCTGAT
CTTGCAGACAAGAATCAATTTAGGAACAAACGTAGGCAATTGCAACATAAATACAACCGT
CAACCAGAACCAGATAGCACAACTCCTGATCATCCAAACCAGCGCAACCTTGGACGCTTG
CCAGGGAATCTACATGCAAACAACTGGAAGAAGTCGCCTTACCAGGTAAGAAAACCAAGC
TACTTGCTTGGTTCTGGAACCGGTGGAGCAGCTCACAGTACACTGCAAGAGCAAGCCCGA
ATGCAACTAGTGGGAAGATATCAGTCACAGTTAGTTGTTAGTAAAGATCCCACACCTGTG
TCCACTTCGGTTGTTGATTCTTCCACATCTGTCTTAACCACCGACAATGCCAACCTAGTT
TCACAGAGCAGTGAGGTAACTTCTGCTGGAAATGTGATTGACCTCAATCAAGACCTTCTT
ACATCACAGCAAGTGGTTGATGGCCAGGCAGCACAGGTGGTAAATGAAGATGGTTCTCCT
GCTATTGCTGCAGAAGAGGGCAAACAACTTGTTGCCATTGGTGATGGCCAGTATGTAGAG
CTTCCTGAAGGCTACACATTAATTCAGACCGATGATGGGTACATCATTGGACAGCCAGGA
GCCACATTTGTGCAGGGTGAAGATGGAAATGTTTACATGACAAGTACAGAGGATGGAACA
GAAGCAAACACTCAGGTTTTGACAACAACTGCTCCCATTGGGGAAACTGCAAGCACTGAT
GCTTTGCTGGATCAGCTTGGACAAACTTGA

InterProScan

SMART
AT_hook_DNA-bd_motif (IPR017956) - T[321-333] 5.9 - T[556-568] 1.0
Pfam
DUF4764 (IPR031885) - T[827-995] 1.5E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value