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  1. Transcript 'KH2012:KH.C2.236.v1....' > 
  2. Transcript 'KH2012:KH.C5.392.v2....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1602.g15218.01.t

Possible name(s)

PTPN23; RHPN1; RHPN2

Gene model

Phmamm.CG.MTP2014.S1602.g15218

Location

S1602 [14,659 / 30,187]

Sequences

Amino acid sequence

Length: 517

>Phmamm.CG.MTP2014.S1602.g15218.01.p
DCITGVPAVQRSVSLEKASILFNIGALYSQLGTRADRTRRKGINIAIDAFQSSAGAFDFV
RSNFVNAPTTDLSTSVLQSLTLLMLAQAQECVLERKVLGGFEIQLGKCASISQEAMKVSE
KYSAADKAFSLSEVKSYVPYSWINMAQVKRHHYRALAHYYAGLGLLEQHEAAEPLEISKL
LSNLYLNEKYSEDHPKHDDVAQRKEDRRRLGKSHLRQSVFYHERALQTHSLCKMLRTVDI
LKEYLQHAHNRSVAKFAEVDTEEDFFEIIGAPDIQPYTEYESDMIAPSFSSVPSSDIFHR
LGPVSIFSAHNRLGPVRLVKLSTQEEKCSFTLQGDGPVIVSNLDDVAMQLGIRNNDVLVA
VDDVDAKWSDHDQVANEITEKPSVELKLISVLGSFAPPAISANESMQPNPNRNQNNNNSN
NGAVVRRRQLPNKSREIKKRHSFGIFTGLRLKTKANVSNRFSTISENPAGIQEVGAGARR
PPHSVSVQRSATSAKYVYGQGTVLRPKKDPYSYRSQC

Nucleotide sequence

Length: 1,813

>Phmamm.CG.MTP2014.S1602.g15218.01.t
CGATTGCATTACTGGTGTACCGGCAGTCCAGCGTTCAGTATCATTAGAAAAAGCGAGTAT
CCTCTTTAACATCGGAGCCTTGTACTCCCAACTTGGCACCAGGGCTGACCGCACCCGGCG
CAAAGGCATCAATATTGCAATAGACGCCTTTCAAAGTTCGGCGGGTGCTTTCGATTTTGT
GCGTTCTAACTTTGTTAACGCTCCAACCACCGACCTCAGCACTTCGGTTCTGCAATCCCT
TACTCTTCTGATGCTTGCACAAGCTCAAGAGTGTGTCCTGGAACGAAAAGTGCTTGGAGG
ATTTGAAATCCAACTGGGAAAATGCGCCTCCATTTCCCAAGAAGCGATGAAGGTGTCTGA
AAAGTACAGCGCAGCCGACAAAGCCTTCAGTTTAAGTGAAGTGAAATCATACGTTCCGTA
TTCGTGGATCAACATGGCGCAAGTGAAGAGGCACCACTACAGGGCGCTAGCACACTACTA
TGCTGGGCTGGGACTGCTTGAGCAACATGAGGCTGCTGAACCACTTGAAATATCAAAACT
TCTTTCCAATCTTTACTTGAATGAGAAATACAGTGAGGATCACCCTAAGCATGATGATGT
GGCTCAGAGGAAAGAGGACAGGAGGAGATTGGGAAAATCGCATCTCCGCCAGTCTGTGTT
CTACCACGAAAGAGCTTTGCAAACACACAGTTTGTGCAAGATGCTGCGAACTGTCGATAT
TTTAAAGGAATACTTGCAACACGCACACAACCGATCTGTCGCCAAATTTGCTGAAGTTGA
CACTGAGGAAGACTTTTTTGAGATTATTGGAGCGCCCGACATACAACCTTACACTGAATA
CGAGAGTGACATGATCGCTCCTTCGTTTTCAAGCGTCCCCTCATCCGATATTTTCCATCG
CTTGGGTCCTGTCTCCATATTTTCAGCTCACAACCGACTGGGCCCGGTTCGCTTAGTAAA
ACTTTCAACACAGGAAGAAAAATGTTCGTTCACTTTACAAGGGGATGGACCAGTTATTGT
GAGCAACCTTGACGATGTCGCAATGCAACTTGGCATACGTAATAATGACGTACTAGTGGC
AGTTGATGACGTGGATGCGAAGTGGAGTGACCATGATCAGGTCGCAAACGAGATTACTGA
AAAACCCAGCGTTGAACTCAAGTTGATTTCAGTCCTCGGTAGTTTTGCTCCTCCAGCGAT
ATCAGCAAATGAATCGATGCAACCTAATCCGAACAGAAATCAAAACAATAATAACTCGAA
CAATGGTGCAGTTGTGCGCAGACGCCAACTTCCAAATAAATCACGTGAAATTAAAAAGCG
ACATTCTTTTGGCATCTTCACCGGACTCCGTTTAAAGACCAAAGCCAACGTCTCGAACCG
GTTTTCGACGATTTCTGAAAATCCTGCGGGAATCCAGGAGGTCGGAGCCGGCGCGAGAAG
GCCCCCGCACTCGGTGTCTGTGCAAAGGAGCGCTACATCTGCTAAGTACGTTTACGGGCA
GGGCACTGTACTAAGACCGAAAAAGGACCCTTACAGTTACCGTTCTCAGTGCTGATGAAA
GGTTTTCGCAAAGATGTCGTTTTACATCTTTCGATTATCTGGTATAATTTCGACTATTTT
TTTTTGTACCAACAGATATACGAAAAATAGGGATAATATTGGTACAACAATTAAACAGCT
TGTATTTGCATTATGTGCTTTTCACTTTGTACTAATTGTCCTACTTTCTGTGCACTTTAT
TTTTCGTACTATTGTACGAAGTTTCGCTGCTTTTCTTTAAAGTCAAACCACTTTGACACC
GTTTTTATCGACA

InterProScan

ProSiteProfiles
BRO1_dom (IPR004328) - T[1-304] 31.185
SMART
BRO1_dom (IPR004328) - T[1-316] 1.2E-53
Gene3D
BRO1_sf (IPR038499) - T[1-251] 6.7E-52
Pfam
BRO1_dom (IPR004328) - T[4-311] 1.1E-56
SUPERFAMILY
PDZ_sf (IPR036034) - T[288-390] 3.99E-7
SMART
PDZ (IPR001478) - T[326-392] 4.8E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHPN2_HUMAN 40 % 290 3.84E-90
RHPN1_HUMAN 34.656 % 264 1.82E-80
RHN2P_HUMAN 35.556 % 233 1.73E-69