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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S19....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Clone 'ma178n03' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1596.g15197.02.t

Possible name(s)

DNAJC7; SGTA; TTC4

Gene model

Phmamm.CG.MTP2014.S1596.g15197

Location

S1596 [19,612 / 20,818]

Sequences

Amino acid sequence

Length: 401

>Phmamm.CG.MTP2014.S1596.g15197.02.p
MASVKKSKMTDEERQKLIKKLNKETEEFIQQKLEKNKDYKYTDGFTVDNVEEICATHPAF
MQKQPTQEEIDNNPMLQALQAIQYDDPEDTPEEKALELKKDGNFQYKCKKFKRACAAYTE
ALRNKFDNTELRSTLFFNRSAANYQLENFRSSLHDANEAVKLNPDYVKAVVKCAQCCSAL
KRYQDAMDWSKVLLSLDADNTIGNQIYEKSKNSLQIQKRDQRKNEREKEKQRQAKKSLIT
AIKQRGIQLSSISKDAHDNSDEEEDSLKLSEFETLNVSKSMVHLDDKGSLIWPVMFVYPE
FKTTDFIEEFHETSIFLDHLSIMFEQQPDWDTEQHYKLENLEVYYENRQTENLHKVTMES
TLLSVLKEKSMVVQAGTANFIILSRTSKFYDYFMSKHNVIM

Nucleotide sequence

Length: 1,206

>Phmamm.CG.MTP2014.S1596.g15197.02.t
ATGGCAAGTGTGAAGAAATCAAAAATGACAGATGAAGAAAGACAGAAGCTGATCAAAAAA
CTCAACAAAGAAACTGAGGAATTCATCCAACAGAAATTGGAAAAAAACAAAGATTACAAA
TATACAGATGGCTTCACAGTAGATAATGTTGAGGAAATATGTGCGACTCACCCTGCATTT
ATGCAAAAGCAGCCTACACAAGAAGAAATTGACAACAATCCTATGCTTCAAGCTTTGCAA
GCTATTCAATATGATGACCCTGAAGACACACCAGAAGAAAAAGCTTTGGAGTTGAAGAAG
GATGGAAACTTTCAGTACAAGTGCAAAAAATTTAAGCGAGCTTGTGCAGCATATACAGAG
GCACTGCGAAACAAATTCGATAATACAGAACTTCGATCAACATTGTTTTTTAATAGGTCT
GCTGCCAATTATCAGCTTGAAAATTTTAGGTCTTCGTTGCATGATGCCAACGAGGCTGTC
AAGTTGAACCCAGACTATGTTAAAGCTGTAGTAAAATGCGCCCAGTGCTGTAGTGCTTTG
AAACGATACCAGGATGCTATGGACTGGAGCAAAGTTCTGTTAAGTTTGGATGCAGATAAC
ACAATTGGGAATCAAATTTATGAAAAATCAAAAAACTCGCTGCAAATTCAAAAACGGGAT
CAACGTAAAAATGAGCGTGAAAAAGAAAAACAAAGACAAGCTAAAAAAAGTTTGATAACT
GCTATTAAGCAGCGGGGGATTCAACTGTCTAGTATTTCGAAAGATGCACATGATAATTCT
GACGAGGAAGAGGATTCATTGAAGTTGAGTGAATTTGAAACTTTGAATGTTTCGAAGTCT
ATGGTGCATTTGGATGACAAAGGCAGCCTTATTTGGCCTGTAATGTTTGTTTATCCAGAA
TTTAAAACTACTGACTTCATTGAAGAGTTTCATGAAACTTCAATATTTCTTGACCACCTT
AGCATTATGTTTGAGCAACAGCCTGATTGGGATACTGAACAACATTATAAGCTAGAAAAT
CTTGAAGTTTATTATGAAAATCGCCAGACAGAAAACCTACACAAAGTTACTATGGAGAGC
ACACTTCTTAGTGTTTTAAAGGAAAAGAGCATGGTAGTACAAGCAGGGACAGCAAACTTT
ATCATTCTATCAAGGACTTCCAAATTCTATGACTATTTTATGTCTAAACACAATGTTATT
ATGTAA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[85-270] 1.4E-24
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[92-203] 6.4E-20
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[95-200] 10.945

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTC4_HUMAN 37.875 % 251 5.22E-80