Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S156.g04373.01.t

Possible name(s)

EN1; EN2; HOXC5

Gene model

Phmamm.CG.MTP2014.S156.g04373

Location

S156 [141,915 / 143,888]

Sequences

Amino acid sequence

Length: 267

>Phmamm.CG.MTP2014.S156.g04373.01.p
MCAAQVLACSPRERNDSKQNKRVPNFLIDTILNKIPHDTTAPMVSPSASMLLGRQSFDMQ
RERALLAYAHQLTRWGVWIQTAKATSSQYATSLKSTLHKNKTKETKVWNPIHSYSDHLTS
EGGSTTDEDENHIGKLRQMSNVLAKEENEVAATGKIDVQKIATANLTNLQNEKKLNSNEA
KEGKNQALWPAWVYCTRYSNRPSAGPRTRKNQRKNRLSKTDGNDDKRARTVFSPEQLDEL
QREFNESQYLTGERRVRLANNLGLTMA

Nucleotide sequence

Length: 932

>Phmamm.CG.MTP2014.S156.g04373.01.t
CGACTGAAGAAAACTCCAAGATAACAGAAACTGAATGAATAAGTGTTAGAGTTAGCAGGA
GAGCAAGCGCACTTTAGGGATTCTACTTCTGCAAGCAACAGGAAAACACAAGGTAAATTT
GAATCAAAAATGTGCGCTGCACAGGTGTTAGCTTGTTCGCCACGGGAAAGAAACGACAGT
AAACAGAACAAACGGGTACCCAACTTTCTTATCGATACAATTCTAAACAAAATACCACAT
GACACCACAGCACCGATGGTGTCGCCGTCTGCATCGATGTTGCTAGGGCGACAGAGTTTT
GACATGCAACGGGAACGTGCGCTTTTAGCGTATGCGCACCAGTTGACGAGGTGGGGTGTA
TGGATTCAAACGGCAAAAGCAACATCCAGCCAATACGCGACTTCGCTTAAGTCAACGCTA
CATAAGAACAAGACGAAAGAAACTAAAGTTTGGAATCCGATCCATTCTTATTCCGACCAC
CTGACGTCAGAAGGCGGGAGTACCACTGATGAAGATGAAAACCACATTGGCAAGCTGCGT
CAAATGTCCAACGTTCTGGCAAAAGAAGAGAACGAGGTTGCAGCGACAGGAAAAATCGAC
GTTCAGAAAATTGCCACTGCCAACTTGACAAATTTGCAGAACGAGAAAAAATTAAACAGC
AACGAAGCGAAGGAGGGTAAGAACCAAGCGTTGTGGCCAGCGTGGGTATACTGTACCAGG
TATTCCAATCGACCATCTGCAGGTCCACGCACGCGAAAAAACCAACGTAAAAACCGACTT
TCAAAGACGGATGGAAACGACGACAAACGGGCAAGAACAGTTTTTTCCCCTGAACAGCTC
GATGAACTCCAGAGAGAATTTAACGAGAGTCAGTATTTGACTGGAGAAAGAAGAGTGCGA
CTTGCAAACAACCTCGGACTAACAATGGCACA

InterProScan

SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[220-266] 3.98E-10
ProSiteProfiles	Homeobox_dom (IPR001356) - T[223-267] 11.693
SMART	Homeobox_dom (IPR001356) - T[225-267] 0.0032
Pfam	Homeobox_dom (IPR001356) - T[226-266] 2.0E-10
CDD	Homeobox_dom (IPR001356) - T[226-265] 4.66393E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
HME2_HUMAN	53.659 %	83.2	1.92E-18
HME1_HUMAN	51.948 %	76.3	6.94E-16