- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S156.g04362.05.t
Possible name(s)
SDHB
Gene model
Location
S156 [32,311 / 37,394]
Amino acid sequence
Length: 262
>Phmamm.CG.MTP2014.S156.g04362.05.p
VLRKSCQTACLYTQTARCAASAAAVEKEQPRLKTFSVYRWNPEEKGSQPYMKKYKVDLND
CGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIKGTNTLACLSRIDTNLSKPTKI
YPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGVENHQSVEDRQKLDGLYECIL
CACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYTAERLDRLNDPFSLYRCHTIMN
CTKTCPKGLNPGLAIAELKKML
Nucleotide sequence
Length: 788
>Phmamm.CG.MTP2014.S156.g04362.05.t
GTGCTGCGAAAATCATGCCAAACAGCCTGTCTTTACACTCAAACTGCAAGATGTGCTGCC
TCAGCAGCTGCTGTCGAAAAAGAGCAACCAAGATTGAAAACATTTTCTGTCTATCGCTGG
AATCCAGAGGAGAAGGGTTCACAACCATATATGAAGAAATATAAAGTTGATTTAAATGAT
TGTGGTCCCATGGTGCTTGATGCTTTAATTAAGATCAAGAATGAACAAGATCCAACGTTG
ACATTTCGACGTTCATGTCGTGAAGGCATTTGCGGATCGTGTGCAATGAATATCAAAGGA
ACAAACACCTTAGCTTGCTTATCACGAATTGATACAAACTTGAGCAAACCGACAAAGATA
TATCCACTCCCTCACATGTATGTGGTTAAGGATCTTGTCCCTGACATGGCAAATTTCTAT
GCTCAGTATCGTTCAATCGAACCATTTTTGAAGCAGAAAGATGTTTCCAAAGCGGGTGTT
GAAAACCATCAGTCAGTGGAAGACAGGCAAAAGTTGGATGGTCTGTATGAATGCATTTTG
TGTGCTTGTTGTTCCACATCTTGTCCAAGTTACTGGTGGAATCCAACAAAATATCTCGGT
CCCGCTGTTTTGATGCAGGCATACAGATGGATTATTGACAGTCGTGACGAATACACAGCA
GAAAGATTAGATCGTCTTAATGACCCATTCTCGTTATACAGATGTCATACAATCATGAAC
TGCACCAAAACCTGTCCAAAGGGGCTCAATCCAGGTTTGGCTATTGCGGAGTTAAAGAAA
ATGTTGGC
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[21-135] 1.6E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[31-135] 2.71E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[33-126] 9.142 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[34-140] 7.0E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[37-259] 6.9E-84 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[65-114] 0.00453663 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[86-94] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[136-262] 4.4E-60 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[137-261] 4.01E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[168-198] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[178-189] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 74.118 % | 406 | 9.75E-145 |
