- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S156.g04362.04.t
Possible name(s)
SDHB
Gene model
Location
S156 [32,310 / 37,455]
Amino acid sequence
Length: 283
>Phmamm.CG.MTP2014.S156.g04362.04.p
CYFSTSQKVCVMSGFGISRTVLRKSCQTACLYTQTARCAASAAAVEKEQPRLKTFSVYRW
NPEEKGSQPYMKKYKVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIKG
TNTLACLSRIDTNLSKPTKIYPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGV
ENHQSVEDRQKLDGLYECILCACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYTA
ERLDRLNDPFSLYRCHTIMNCTKTCPKGLNPGLAIAELKKMLA
Nucleotide sequence
Length: 850
>Phmamm.CG.MTP2014.S156.g04362.04.t
TTGTTATTTTTCGACTTCACAAAAAGTTTGTGTCATGTCTGGGTTTGGGATTTCTCGTAC
AGTGCTGCGAAAATCATGCCAAACAGCCTGTCTTTACACTCAAACTGCAAGATGTGCTGC
CTCAGCAGCTGCTGTCGAAAAAGAGCAACCAAGATTGAAAACATTTTCTGTCTATCGCTG
GAATCCAGAGGAGAAGGGTTCACAACCATATATGAAGAAATATAAAGTTGATTTAAATGA
TTGTGGTCCCATGGTGCTTGATGCTTTAATTAAGATCAAGAATGAACAAGATCCAACGTT
GACATTTCGACGTTCATGTCGTGAAGGCATTTGCGGATCGTGTGCAATGAATATCAAAGG
AACAAACACCTTAGCTTGCTTATCACGAATTGATACAAACTTGAGCAAACCGACAAAGAT
ATATCCACTCCCTCACATGTATGTGGTTAAGGATCTTGTCCCTGACATGGCAAATTTCTA
TGCTCAGTATCGTTCAATCGAACCATTTTTGAAGCAGAAAGATGTTTCCAAAGCGGGTGT
TGAAAACCATCAGTCAGTGGAAGACAGGCAAAAGTTGGATGGTCTGTATGAATGCATTTT
GTGTGCTTGTTGTTCCACATCTTGTCCAAGTTACTGGTGGAATCCAACAAAATATCTCGG
TCCCGCTGTTTTGATGCAGGCATACAGATGGATTATTGACAGTCGTGACGAATACACAGC
AGAAAGATTAGATCGTCTTAATGACCCATTCTCGTTATACAGATGTCATACAATCATGAA
CTGCACCAAAACCTGTCCAAAGGGGCTCAATCCAGGTTTGGCTATTGCGGAGTTAAAGAA
AATGTTGGCG
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[41-155] 1.9E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[51-155] 3.19E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[53-146] 9.142 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[54-160] 8.4E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[57-279] 9.0E-84 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[85-134] 0.00639579 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[106-114] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[156-283] 3.1E-60 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[157-282] 2.79E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[188-218] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[198-209] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 74.219 % | 408 | 4.25E-145 |
