- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S156.g04362.02.t
Possible name(s)
SDHB
Gene model
Location
S156 [32,013 / 37,417]
Amino acid sequence
Length: 282
>Phmamm.CG.MTP2014.S156.g04362.02.p
GFGISRTVLRKSCQTACLYTQTARCAASAAAVEKEQPRLKTFSVYRWNPEEKGSQPYMKK
YKVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIKGTNTLACLSRIDTN
LSKPTKIYPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGVENHQSVEDRQKLD
GLYECILCACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYTAERLDRLNDPFSLY
RCHTIMNCTKTCPKGLNPGLAIAELKKMLATHNSSAVAISQK
Nucleotide sequence
Length: 946
>Phmamm.CG.MTP2014.S156.g04362.02.t
CTGGGTTTGGGATTTCTCGTACAGTGCTGCGAAAATCATGCCAAACAGCCTGTCTTTACA
CTCAAACTGCAAGATGTGCTGCCTCAGCAGCTGCTGTCGAAAAAGAGCAACCAAGATTGA
AAACATTTTCTGTCTATCGCTGGAATCCAGAGGAGAAGGGTTCACAACCATATATGAAGA
AATATAAAGTTGATTTAAATGATTGTGGTCCCATGGTGCTTGATGCTTTAATTAAGATCA
AGAATGAACAAGATCCAACGTTGACATTTCGACGTTCATGTCGTGAAGGCATTTGCGGAT
CGTGTGCAATGAATATCAAAGGAACAAACACCTTAGCTTGCTTATCACGAATTGATACAA
ACTTGAGCAAACCGACAAAGATATATCCACTCCCTCACATGTATGTGGTTAAGGATCTTG
TCCCTGACATGGCAAATTTCTATGCTCAGTATCGTTCAATCGAACCATTTTTGAAGCAGA
AAGATGTTTCCAAAGCGGGTGTTGAAAACCATCAGTCAGTGGAAGACAGGCAAAAGTTGG
ATGGTCTGTATGAATGCATTTTGTGTGCTTGTTGTTCCACATCTTGTCCAAGTTACTGGT
GGAATCCAACAAAATATCTCGGTCCCGCTGTTTTGATGCAGGCATACAGATGGATTATTG
ACAGTCGTGACGAATACACAGCAGAAAGATTAGATCGTCTTAATGACCCATTCTCGTTAT
ACAGATGTCATACAATCATGAACTGCACCAAAACCTGTCCAAAGGGGCTCAATCCAGGTT
TGGCTATTGCGGAGTTAAAGAAAATGCTGGCAACTCACAATTCATCAGCTGTAGCAATCT
CCCAGAAATAATTTGTTGTTTTTGTGCAGATGTGTTGGCCTTGTAAAAATGTAACCCACT
TTTTGGTTGTCTGTATTTGTGTGAGGAGAAATAAATTATATCAGAC
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[28-142] 1.8E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[38-142] 3.19E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[40-133] 9.142 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[41-147] 8.3E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[44-266] 8.9E-84 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[72-121] 0.00350256 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[93-101] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[143-278] 4.8E-61 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[144-271] 1.26E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[175-205] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[185-196] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 72.075 % | 412 | 5.47E-147 |
