- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S156.g04362.01.t
Possible name(s)
SDHB
Gene model
Location
S156 [32,011 / 37,455]
Amino acid sequence
Length: 295
>Phmamm.CG.MTP2014.S156.g04362.01.p
CYFSTSQKVCVMSGFGISRTVLRKSCQTACLYTQTARCAASAAAVEKEQPRLKTFSVYRW
NPEEKGSQPYMKKYKVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIKG
TNTLACLSRIDTNLSKPTKIYPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGV
ENHQSVEDRQKLDGLYECILCACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYTA
ERLDRLNDPFSLYRCHTIMNCTKTCPKGLNPGLAIAELKKMLATHNSSAVAISQK
Nucleotide sequence
Length: 986
>Phmamm.CG.MTP2014.S156.g04362.01.t
TTGTTATTTTTCGACTTCACAAAAAGTTTGTGTCATGTCTGGGTTTGGGATTTCTCGTAC
AGTGCTGCGAAAATCATGCCAAACAGCCTGTCTTTACACTCAAACTGCAAGATGTGCTGC
CTCAGCAGCTGCTGTCGAAAAAGAGCAACCAAGATTGAAAACATTTTCTGTCTATCGCTG
GAATCCAGAGGAGAAGGGTTCACAACCATATATGAAGAAATATAAAGTTGATTTAAATGA
TTGTGGTCCCATGGTGCTTGATGCTTTAATTAAGATCAAGAATGAACAAGATCCAACGTT
GACATTTCGACGTTCATGTCGTGAAGGCATTTGCGGATCGTGTGCAATGAATATCAAAGG
AACAAACACCTTAGCTTGCTTATCACGAATTGATACAAACTTGAGCAAACCGACAAAGAT
ATATCCACTCCCTCACATGTATGTGGTTAAGGATCTTGTCCCTGACATGGCAAATTTCTA
TGCTCAGTATCGTTCAATCGAACCATTTTTGAAGCAGAAAGATGTTTCCAAAGCGGGTGT
TGAAAACCATCAGTCAGTGGAAGACAGGCAAAAGTTGGATGGTCTGTATGAATGCATTTT
GTGTGCTTGTTGTTCCACATCTTGTCCAAGTTACTGGTGGAATCCAACAAAATATCTCGG
TCCCGCTGTTTTGATGCAGGCATACAGATGGATTATTGACAGTCGTGACGAATACACAGC
AGAAAGATTAGATCGTCTTAATGACCCATTCTCGTTATACAGATGTCATACAATCATGAA
CTGCACCAAAACCTGTCCAAAGGGGCTCAATCCAGGTTTGGCTATTGCGGAGTTAAAGAA
AATGCTGGCAACTCACAATTCATCAGCTGTAGCAATCTCCCAGAAATAATTTGTTGTTTT
TGTGCAGATGTGTTGGCCTTGTAAAAATGTAACCCACTTTTTGGTTGTCTGTATTTGTGT
GAGGAGAAATAAATTATATCAGACCT
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[41-155] 2.0E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[51-155] 3.46E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[53-146] 9.142 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[54-160] 9.1E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[57-279] 1.0E-83 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[85-134] 0.00535089 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[106-114] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[156-291] 5.3E-61 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[157-284] 1.4E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[188-218] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[198-209] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 72.075 % | 412 | 8.68E-147 |
