- Transcript 'KH2012:KH.C13.118.v4...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R251...' >
- Transcript 'Moocci.CG.ELv1_2.S15...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S152.g04291.02.t
Possible name(s)
MKRN1; MKRN2; MKRN3
Gene model
Location
S152 [121,009 / 126,004]
Amino acid sequence
Length: 390
>Phmamm.CG.MTP2014.S152.g04291.02.p
MATEQASEPWSKKILCRYYLHGICKFGNSCKYSHDRKDPLDMVCRYYQSGKCVYGDKCRP
TILDSKSNDVDWVNAAEFVPGKQYSPRDVGTYSSAVKTGIDKEASPSTLCSKFDELCPYA
LNGDCSNGENCAFLHGLMCDMCGLNILHPTDVKQQEKHKEECFQYHEEDMKESFKIAKSS
ELACGICMEVVWEKAQKKDRKFGILENCNHPFCLDCIRKWRSAKAFNNTVVKACPQCRVS
SSFVTPSETWIEDQEEKQKLIKGYKDHLSVKSCKYFDKGRGKCPFGANCFYLHAYPDGTK
QDRSKIKTRTVTGRDGRSRSIDPNTLWEFFEEREGHPADQETLLSLLQEDMDLFDLIYLL
GDDSYTSSDDDNFSVDSMGMFDLHVWADSD
Nucleotide sequence
Length: 1,173
>Phmamm.CG.MTP2014.S152.g04291.02.t
ATGGCAACAGAACAAGCCAGCGAGCCTTGGTCAAAGAAAATTCTCTGCCGATATTACTTA
CATGGAATTTGCAAGTTTGGAAACAGTTGTAAATACTCACATGATAGGAAAGATCCCTTG
GACATGGTTTGCAGATATTATCAAAGTGGAAAATGTGTTTATGGAGATAAATGCAGACCG
ACTATTCTGGACAGCAAGTCCAATGATGTCGACTGGGTAAATGCTGCAGAATTTGTTCCA
GGAAAACAGTATTCCCCAAGAGATGTTGGCACATACAGTTCTGCAGTCAAAACTGGAATT
GATAAAGAAGCGTCTCCATCAACATTGTGTAGCAAATTTGATGAGTTATGTCCATATGCC
TTAAATGGTGATTGCAGTAATGGTGAAAATTGTGCCTTCTTACATGGTTTGATGTGTGAC
ATGTGTGGTCTGAATATTCTACATCCTACTGATGTTAAACAGCAGGAAAAACATAAAGAG
GAATGTTTTCAATATCATGAGGAAGACATGAAGGAATCATTTAAGATTGCCAAAAGCAGT
GAACTAGCGTGCGGAATCTGTATGGAAGTGGTTTGGGAAAAGGCACAGAAAAAAGACAGA
AAGTTTGGTATTCTGGAAAATTGCAATCATCCATTCTGTTTAGACTGTATTCGAAAGTGG
AGGAGTGCAAAGGCCTTTAATAATACAGTTGTAAAGGCTTGTCCTCAGTGCAGAGTTTCT
TCATCATTTGTTACACCTAGCGAAACATGGATTGAAGACCAAGAAGAGAAACAAAAACTC
ATTAAGGGTTATAAAGATCATCTCAGTGTAAAATCATGCAAGTATTTCGACAAGGGTAGA
GGAAAATGTCCGTTCGGCGCCAACTGCTTCTATTTACATGCTTATCCGGACGGCACAAAA
CAAGATCGAAGTAAGATCAAGACAAGAACTGTCACAGGCAGGGACGGCAGATCTAGGTCC
ATCGATCCTAACACGTTGTGGGAATTCTTCGAGGAGAGAGAAGGTCACCCTGCCGATCAG
GAAACATTGCTTTCCCTGCTCCAGGAAGACATGGATTTGTTCGATCTCATCTACTTGCTA
GGTGACGATTCCTACACGTCAAGTGATGATGACAATTTCTCGGTCGATTCCATGGGAATG
TTTGACTTGCACGTCTGGGCCGATTCCGATTAG
| SMART |
Znf_CCCH (IPR000571) - T[10-36] 1.5E-6 - T[38-61] 1.6 - T[112-137] 0.0019 - T[269-295] 0.11 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[10-37] 16.699 - T[38-59] 9.714 - T[111-138] 12.314 - T[268-296] 13.244 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[11-35] 6.93E-7 - T[112-136] 2.35E-5 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[174-271] 1.2E-10 |
| Pfam |
Znf_C3HC4_RING-type (IPR018957) - T[184-237] 1.2E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[184-238] 12.047 |
| SMART |
Znf_RING (IPR001841) - T[184-237] 1.7E-7 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[208-217] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MKRN1_HUMAN | 43.75 % | 352 | 1.24E-118 |
| MKRN4_HUMAN | 44.059 % | 345 | 1.22E-115 |
| MKRN3_HUMAN | 42.9 % | 273 | 1.42E-87 |