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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'ma213l20' > 
  3. Transcript 'Boleac.CG.SB_v3.S369...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1524.g15033.02.t

Possible name(s)

Phmamm.CG.MTP2014.S1524.g15033

Gene model

Phmamm.CG.MTP2014.S1524.g15033

Location

S1524 [25,125 / 28,978]

Sequences

Amino acid sequence

Length: 411

>Phmamm.CG.MTP2014.S1524.g15033.02.p
MVLFAGGLSLVQPRQIHSSNGFLQLNLSVQVGEFTVDWLTLSRRSYNGEFPGPTWRIKPG
DVVNLTLRPHDNVFVNVTPENGQYHYNYPIVSDHPAGTYWYHPHLHGSVDFQTNSGMSGM
IIVEDPTDSTTPQHLLDASCPGKCEHDVQLIFQSLLFYTGHGFASAQQSMHDRLFTMVNA
GARQVLELFVADEHNNSACDFYEIAVDGVYLDNPTRPRFGKSFVVPASRIDWLIVCNKPG
TYYLKSYAPDFEMISTAKISRYNGTLLTIVATGPETKTTIPTELPKRPEYNVEVDTVQEW
YLTNTGTVESHPIHIHVNSFQVISYNAYTGPFDSNSMKYWNQKMEPCFYQFGGYNESADV
QIPKDPLRYLGHEKRWKDGNGGPETIGLSQPGVFRDVILVPPLSNITVNKF

Nucleotide sequence

Length: 1,236

>Phmamm.CG.MTP2014.S1524.g15033.02.t
ATGGTCCTATTTGCAGGAGGACTTTCTTTAGTCCAGCCCCGACAGATTCATTCTTCAAAT
GGGTTTCTGCAACTGAATCTTTCGGTACAAGTCGGTGAGTTCACAGTGGATTGGCTAACA
CTTTCCAGACGAAGCTACAACGGGGAATTCCCAGGACCGACGTGGCGTATTAAACCAGGA
GATGTAGTGAACCTAACATTGCGCCCCCATGACAACGTCTTTGTGAACGTGACACCAGAA
AATGGACAGTATCATTACAACTATCCTATAGTTTCTGATCATCCAGCAGGAACCTATTGG
TACCATCCTCATCTACATGGATCAGTAGACTTTCAGACGAATAGTGGAATGTCGGGAATG
ATTATTGTTGAGGATCCAACTGACTCTACAACACCTCAGCACTTACTTGATGCATCGTGT
CCAGGCAAATGCGAACATGATGTGCAGCTGATATTTCAATCCTTGCTCTTTTATACTGGC
CATGGATTCGCATCTGCCCAACAATCGATGCACGACCGACTTTTCACGATGGTTAATGCA
GGAGCAAGACAAGTTTTAGAGTTGTTTGTGGCGGATGAGCATAACAACTCGGCTTGTGAT
TTCTATGAGATCGCTGTCGATGGAGTTTATCTGGACAATCCAACTCGTCCACGATTTGGA
AAAAGCTTCGTTGTTCCTGCTTCAAGAATAGACTGGTTGATTGTCTGCAACAAACCCGGG
ACCTACTATTTAAAGTCTTACGCCCCAGATTTCGAGATGATTTCCACAGCGAAGATTTCT
AGATATAACGGAACCCTTCTTACAATCGTAGCAACTGGGCCAGAAACAAAAACTACCATC
CCCACCGAGCTTCCTAAACGACCCGAGTATAATGTGGAAGTTGACACAGTCCAGGAATGG
TATCTTACCAACACAGGAACAGTTGAAAGCCACCCAATTCATATTCACGTCAACAGCTTT
CAAGTTATTAGTTACAACGCTTATACCGGTCCATTCGATAGCAACAGCATGAAGTACTGG
AATCAGAAGATGGAACCTTGCTTCTATCAATTTGGAGGCTACAACGAATCCGCCGACGTC
CAAATACCAAAAGATCCGCTCAGGTATCTCGGCCATGAAAAGCGCTGGAAGGATGGAAAC
GGTGGACCTGAAACCATTGGTCTCTCGCAGCCTGGAGTTTTCCGTGACGTCATCCTGGTG
CCACCGTTGTCCAACATCACAGTAAACAAGTTTTAG

InterProScan

Gene3D
Cupredoxin (IPR008972) - T[8-69] 2.8E-7 - T[70-150] 1.0E-14 - T[171-276] 9.5E-8
SUPERFAMILY
Cupredoxin (IPR008972) - T[14-128] 2.28E-17 - T[262-406] 3.61E-10
Pfam
Cu-oxidase_3 (IPR011707) - T[79-127] 1.7E-7
Pfam
Cu-oxidase_2 (IPR011706) - T[280-342] 9.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value