- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S150.g04255.02.t
Possible name(s)
GNPTG; LRP3; PRKCSH
Gene model
Location
S150 [182,387 / 186,624]
Amino acid sequence
Length: 396
>Phmamm.CG.MTP2014.S150.g04255.02.p
QMVQVDRPRGVSLTKKVLYDPAKEFTCFDGSQTIQFQFVNDDYCDCNDGSDEPGTSACPN
GSFHCTNAGYRPQNIPSSRVNDGICDCCDGTDEWKTPTACANTCMELRRAALEENKKKME
ESSKGFALRQEYAKTGQAKKLERQEKVKELQQELAQIQLLEDTLKTEKEAIEIQETAAID
EHKRIAEEKQQKIAHEENLRKGAEAFSEMDVDKDGSLTIPELLSHPELDPDTSDGIFTEE
EALTILQAGSVDMAVFMDTVWGAINETFRTNIPPPMEEQEAPAEDQIQDGSEQEREADRE
LLEEPEEEDQDQDEEDEDSDEEYDDEHEYDEDGEYREPPVLRKETDTSNSGEPYDEITQN
LVNQANEARSKFQEAQTKKKNLENEVEYELFKKNGK
Nucleotide sequence
Length: 1,621
>Phmamm.CG.MTP2014.S150.g04255.02.t
CACAAATGGTCCAGGTTGATCGTCCAAGGGGAGTGTCTCTAACCAAAAAAGTTTTATACG
ACCCAGCAAAAGAATTCACATGCTTTGATGGAAGCCAAACTATACAGTTTCAATTTGTAA
ATGATGATTATTGTGACTGCAATGATGGTTCAGATGAGCCTGGAACATCTGCTTGTCCCA
ATGGTTCGTTTCATTGCACAAATGCAGGTTATCGTCCGCAAAACATTCCATCTTCCCGAG
TAAATGATGGAATATGTGATTGTTGTGATGGCACCGATGAATGGAAAACTCCAACAGCCT
GTGCCAATACTTGTATGGAGCTAAGACGAGCTGCACTTGAAGAAAACAAAAAGAAAATGG
AGGAATCAAGTAAAGGTTTTGCTTTACGCCAGGAGTATGCTAAAACTGGACAGGCTAAGA
AACTTGAGCGCCAGGAAAAGGTCAAGGAATTGCAGCAGGAGTTAGCCCAAATCCAACTTT
TGGAAGATACTTTAAAAACTGAAAAAGAAGCGATTGAAATTCAAGAAACTGCTGCAATTG
ATGAGCACAAGCGCATTGCGGAAGAAAAACAACAAAAGATTGCACATGAGGAAAATTTAA
GAAAAGGTGCGGAAGCATTTTCTGAGATGGATGTGGATAAAGATGGCAGTTTAACCATTC
CTGAGCTTCTGTCTCATCCTGAACTGGACCCTGACACATCAGATGGAATATTTACTGAGG
AAGAAGCTTTGACAATCCTACAAGCTGGCAGTGTTGACATGGCAGTTTTTATGGATACTG
TTTGGGGTGCAATAAATGAAACTTTCAGAACCAATATTCCACCACCCATGGAGGAACAGG
AAGCACCTGCAGAAGATCAGATTCAGGATGGATCAGAGCAGGAGAGGGAAGCAGACAGAG
AATTGTTGGAGGAGCCTGAGGAAGAAGATCAGGATCAGGATGAGGAGGATGAGGATAGTG
ATGAAGAGTATGATGATGAGCATGAATATGATGAAGATGGAGAGTATCGTGAACCACCAG
TACTAAGAAAGGAGACTGATACTTCTAATAGTGGAGAGCCATATGATGAAATTACACAGA
ATTTGGTTAATCAGGCTAATGAAGCACGTTCCAAGTTTCAGGAAGCACAAACCAAAAAGA
AAAACTTGGAAAATGAAGTGGAGTATGAATTGTTTAAAAAGAATGGTAAATGAGGTTTGT
GGGAGAATTCTAACTGACATTTTATGCAGATCTTTGAACAAAGCTCTGGAGTTGGACTTT
GGTCCTGATGAAGGTTACCAGGCTTTGCAGTTTCAATGCTTTGAACTATTGACCATGGAA
TACAAATACAAACTTTGCCCTTATGACAAAGCAACACAAAGTCCGAAAAATGGTGGATCA
GAAACTGTGCTTGGGCGATGGGGTTCTTGGTCTGGACCACCAGAAAACATTTATGCAAAG
ATGATGTATGAAAATGGAATAACATGTTGGAATGGTCCAGCAAGATCAACAGAGGTTGTA
ATTCGTTGTGGTATGGAACATAAACTGCTCTCGGTGGATGAACCATCTAGATGTGCATAC
AAATATGAGTTTGCCACCCCTTGTGCTTGTACACAGGTTGATCCAAATGCTTTACCAAGA
G
| PANTHER |
Glucosidase_2_bsu (IPR026874) - T[4-387] 9.2E-63 |
| Pfam |
PRKCSH_N (IPR028146) - T[5-156] 2.7E-42 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[19-54] 8.51E-5 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[57-101] 8.8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[58-94] 1.09573E-4 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[197-232] 9.074 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[210-222] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLU2B_HUMAN | 46.237 % | 248 | 1.66E-77 |