- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S150.g04250.03.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S150 [151,678 / 153,515]
Amino acid sequence
Length: 428
>Phmamm.CG.MTP2014.S150.g04250.03.p
MASGDFTCNGGSNWLEESLKENDPDIYRIIRNEKERQRDGLELIASENFASAAVLQALGS
CLNNKYSEGYPGVRYYGGTENIDELERLCQKRALSLYKLSPEEWGVNVQPYSGSPGNFAV
YTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGLIDYEQLA
NNAKLFKPKMIIAGMSCYPRLLDYKKFREIASENQAYLMADMAHVSGLVAAGVIPSPFEH
CDIVTSTTHKTLRGPRAGIIFYRRGVRFPATQTKPAVMYNLEKPINEAVFPGLQGGPHNH
AIAGVAVALHQAATPQFVEYQKRVIRNSQELAKSLTKMGYTVVSGGTDTHLILVNLTSQG
TDGNRTDKVLELIGVACNKNTCPGDKSALRPSGLRLGSPALTSRGLNENDFQKVAEFVDR
YDDGLILD
Nucleotide sequence
Length: 1,287
>Phmamm.CG.MTP2014.S150.g04250.03.t
ATGGCTTCAGGCGATTTTACTTGTAATGGCGGTTCAAACTGGCTGGAGGAGTCGCTTAAA
GAAAATGACCCTGATATTTACAGAATTATTCGAAATGAAAAGGAGCGCCAAAGGGACGGA
CTGGAATTAATCGCCTCAGAAAATTTTGCAAGTGCCGCCGTTCTGCAAGCACTTGGTTCA
TGTTTGAACAACAAGTATTCGGAAGGCTATCCAGGCGTAAGATACTATGGTGGTACAGAA
AACATTGATGAATTAGAAAGACTTTGTCAAAAAAGAGCACTGAGTCTGTATAAGTTGTCA
CCAGAAGAATGGGGTGTAAATGTGCAGCCATATTCTGGTTCACCAGGAAATTTTGCTGTA
TATACTGCAATTGTTGAGCCACATGGACGGATTATGGGATTGGATTTACCTGACGGAGGA
CATTTGACTCATGGGTTTATGACAGAGAAAAAGAAAATCTCTGCCACTTCTATATTTTTT
GAATCCATGCCATATAAAGTTAATCCAGAAACAGGTTTAATTGATTATGAGCAACTTGCA
AACAATGCCAAATTATTTAAACCAAAAATGATTATAGCAGGAATGAGCTGCTATCCCCGT
CTTCTGGATTATAAAAAATTCAGAGAAATTGCTTCAGAAAACCAAGCATATTTAATGGCA
GACATGGCTCATGTTAGTGGGCTAGTTGCTGCTGGAGTTATTCCATCACCATTCGAACAC
TGTGACATTGTGACAAGTACCACTCATAAAACATTGAGGGGTCCACGGGCAGGAATTATA
TTCTATCGCCGAGGTGTTAGATTTCCAGCAACACAAACAAAGCCTGCTGTAATGTACAAT
CTGGAAAAGCCAATAAATGAAGCTGTGTTTCCTGGTCTGCAGGGTGGGCCACATAATCAT
GCAATTGCTGGTGTTGCAGTAGCTTTACATCAAGCTGCAACACCTCAGTTTGTTGAATAT
CAAAAGCGGGTTATCCGAAATTCGCAAGAGCTTGCCAAATCACTTACCAAAATGGGCTAT
ACTGTTGTTTCTGGTGGCACTGATACTCATCTTATTCTTGTAAACCTGACAAGCCAGGGA
ACAGATGGAAATCGTACTGACAAAGTTCTTGAGCTAATTGGTGTGGCTTGCAACAAGAAC
ACTTGTCCAGGTGACAAATCAGCTTTGCGTCCAAGTGGTTTGCGACTAGGCTCGCCTGCA
TTGACTTCAAGAGGCTTAAACGAAAATGATTTCCAAAAGGTGGCTGAGTTTGTTGACAGG
TATGATGATGGCTTAATTTTAGATTAG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[5-423] 2.3E-168 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[14-421] 1.94E-171 |
| PANTHER |
Ser_HO-MeTrfase (IPR001085) - T[15-420] 5.2E-219 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[18-428] 41.305 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[20-420] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[23-420] 2.9E-200 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[48-322] 2.9E-200 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[242-258] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 73.399 % | 613 | 0 |
| GLYM_HUMAN | 64.356 % | 572 | 0 |