- EST 'AHC0AAA232YP09_RM1' >
- Transcript 'Moocci.CG.ELv1_2.S54...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S150.g04250.02.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S150 [151,627 / 153,976]
Amino acid sequence
Length: 494
>Phmamm.CG.MTP2014.S150.g04250.02.p
VSVARGWCVVAALEERTMASGDFTCNGGSNWLEESLKENDPDIYRIIRNEKERQRDGLEL
IASENFASAAVLQALGSCLNNKYSEGYPGVRYYGGTENIDELERLCQKRALSLYKLSPEE
WGVNVQPYSGSPGNFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESM
PYKVNPETGLIDYEQLANNAKLFKPKMIIAGMSCYPRLLDYKKFREIASENQAYLMADMA
HVSGLVAAGVIPSPFEHCDIVTSTTHKTLRGPRAGIIFYRRGVRFPATQTKPAVMYNLEK
PINEAVFPGLQGGPHNHAIAGVAVALHQAATPQFVEYQKRVIRNSQELAKSLTKMGYTVV
SGGTDTHLILVNLTSQGTDGNRTDKVLELIGVACNKNTCPGDKSALRPSGLRLGSPALTS
RGLNENDFQKVAEFVDRGVQLTVEIQSSLSPKATFKDFKTKLYGDPGVQQKITEIKNEVT
AFARGFNIPGLQYL
Nucleotide sequence
Length: 1,485
>Phmamm.CG.MTP2014.S150.g04250.02.t
GTATCTGTGGCACGTGGTTGGTGTGTTGTTGCTGCATTGGAAGAAAGGACCATGGCTTCA
GGCGATTTTACTTGTAATGGCGGTTCAAACTGGCTGGAGGAGTCGCTTAAAGAAAATGAC
CCTGATATTTACAGAATTATTCGAAATGAAAAGGAGCGCCAAAGGGACGGACTGGAATTA
ATCGCCTCAGAAAATTTTGCAAGTGCCGCCGTTCTGCAAGCACTTGGTTCATGTTTGAAC
AACAAGTATTCGGAAGGCTATCCAGGCGTAAGATACTATGGTGGTACAGAAAACATTGAT
GAATTAGAAAGACTTTGTCAAAAAAGAGCACTGAGTCTGTATAAGTTGTCACCAGAAGAA
TGGGGTGTAAATGTGCAGCCATATTCTGGTTCACCAGGAAATTTTGCTGTATATACTGCA
ATTGTTGAGCCACATGGACGGATTATGGGATTGGATTTACCTGACGGAGGACATTTGACT
CATGGGTTTATGACAGAGAAAAAGAAAATCTCTGCCACTTCTATATTTTTTGAATCCATG
CCATATAAAGTTAATCCAGAAACAGGTTTAATTGATTATGAGCAACTTGCAAACAATGCC
AAATTATTTAAACCAAAAATGATTATAGCAGGAATGAGCTGCTATCCCCGTCTTCTGGAT
TATAAAAAATTCAGAGAAATTGCTTCAGAAAACCAAGCATATTTAATGGCAGACATGGCT
CATGTTAGTGGGCTAGTTGCTGCTGGAGTTATTCCATCACCATTCGAACACTGTGACATT
GTGACAAGTACCACTCATAAAACATTGAGGGGTCCACGGGCAGGAATTATATTCTATCGC
CGAGGTGTTAGATTTCCAGCAACACAAACAAAGCCTGCTGTAATGTACAATCTGGAAAAG
CCAATAAATGAAGCTGTGTTTCCTGGTCTGCAGGGTGGGCCACATAATCATGCAATTGCT
GGTGTTGCAGTAGCTTTACATCAAGCTGCAACACCTCAGTTTGTTGAATATCAAAAGCGG
GTTATCCGAAATTCGCAAGAGCTTGCCAAATCACTTACCAAAATGGGCTATACTGTTGTT
TCTGGTGGCACTGATACTCATCTTATTCTTGTAAACCTGACAAGCCAGGGAACAGATGGA
AATCGTACTGACAAAGTTCTTGAGCTAATTGGTGTGGCTTGCAACAAGAACACTTGTCCA
GGTGACAAATCAGCTTTGCGTCCAAGTGGTTTGCGACTAGGCTCGCCTGCATTGACTTCA
AGAGGCTTAAACGAAAATGATTTCCAAAAGGTGGCTGAGTTTGTTGACAGGGGCGTTCAA
TTAACAGTTGAAATTCAATCATCTCTGTCACCCAAGGCAACTTTTAAGGATTTTAAGACA
AAATTGTATGGTGATCCAGGAGTGCAACAAAAAATAACAGAGATTAAAAATGAGGTCACT
GCTTTTGCTAGGGGTTTCAATATACCTGGCTTGCAATACTTGTAG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[12-493] 2.9E-173 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[31-490] 6.91E-180 |
| PANTHER |
Ser_HO-MeTrfase (IPR001085) - T[32-492] 4.4E-233 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[35-490] 43.037 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[37-458] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[40-489] 6.2E-211 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[65-339] 6.2E-211 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[259-275] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 69.783 % | 657 | 0 |
| GLYM_HUMAN | 60.566 % | 608 | 0 |