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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.392.v2....'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1508.g14986.01.t

Possible name(s)

PPARA; PPARD; PPARG

Location

S1508 [1,125 / 5,189]

Sequences

Amino acid sequence

Length: 439

>Phmamm.CG.MTP2014.S1508.g14986.01.p
MPRIEKQRIIADIVKSKISNPECSKSQVDHSKLHCLINSITKSFQSKVSITRSKVLLKWE
ERLMNPGQASTLTCLGDIAAVYPQLIQKVGNGYLESGGKHSAQISLDELLSVPEQAFPNH
SIKGNVKKPPSDDIPMLPFIPEKIEPSVFSQQPLEKLTADQNCPKEIDQHFLNVKSMNQM
QNPMMLGEFDQDKFPGLLELGSFPTRLFIQDVPLFDLDSWRPTSSLESSPGSSSSGVSEN
SSSSENLNLEGSKNFTELYEKFQNVLRTKPEVLNDIDQEKTASRGCLNMGLTPEHKIKLM
GASEAFKRQLEQRKGKESDISPVKVVLLKFGSYEALFVMLSLCVMDSGIFLPASNVHATF
DFIKKLGIGAKLIETKFTFAEKIAMLNLNDADMALFLSSIILSADRPGLSESSKIENAQL
NVLMALQLQLSLSHPDKPR

Nucleotide sequence

Length: 1,320

>Phmamm.CG.MTP2014.S1508.g14986.01.t
ATGCCACGAATTGAGAAGCAGAGAATCATAGCTGACATTGTGAAGTCCAAAATCAGCAAC
CCTGAGTGCAGTAAATCACAAGTTGACCACTCAAAACTACACTGCTTGATTAACAGCATC
ACAAAATCCTTTCAATCAAAAGTGTCAATCACAAGGTCAAAAGTTCTTTTAAAATGGGAA
GAAAGGCTGATGAATCCAGGCCAGGCAAGCACCCTAACCTGTCTGGGGGACATTGCTGCT
GTTTATCCTCAACTTATCCAAAAGGTGGGAAATGGGTACTTGGAAAGTGGAGGAAAGCAT
TCTGCCCAAATTTCACTCGATGAACTGTTGAGTGTTCCAGAGCAGGCATTTCCAAATCAC
TCCATAAAAGGAAATGTGAAAAAGCCACCCTCTGATGATATTCCAATGCTTCCTTTTATT
CCAGAGAAAATTGAACCATCAGTGTTTTCACAACAACCATTGGAAAAGTTAACTGCCGAC
CAAAACTGTCCAAAAGAAATTGATCAACATTTTCTGAATGTTAAATCAATGAACCAAATG
CAAAACCCAATGATGTTGGGTGAATTTGACCAAGATAAATTCCCTGGCTTATTGGAATTG
GGCTCTTTTCCAACCAGATTGTTTATTCAAGATGTCCCTCTGTTTGATCTCGACTCTTGG
AGACCAACCTCTAGTTTAGAGTCTTCCCCTGGAAGCAGTAGCTCAGGAGTTTCAGAAAAT
TCGAGTTCTTCCGAAAACCTAAATCTGGAAGGCAGCAAAAACTTTACCGAGCTGTATGAA
AAATTTCAGAATGTTTTAAGGACTAAACCGGAAGTATTAAACGACATTGACCAAGAGAAA
ACAGCTTCTCGGGGCTGTTTAAATATGGGTCTTACACCTGAACATAAAATCAAGTTAATG
GGGGCTTCAGAAGCATTTAAACGACAGTTAGAGCAAAGAAAAGGAAAAGAAAGTGATATA
TCCCCAGTAAAGGTTGTCTTGCTTAAGTTTGGGAGCTATGAAGCACTGTTTGTGATGCTC
AGCCTTTGTGTGATGGACAGTGGAATATTTTTGCCTGCATCCAATGTTCATGCTACATTT
GATTTTATTAAAAAGCTTGGAATTGGCGCCAAACTTATTGAGACAAAGTTCACATTTGCA
GAAAAGATTGCAATGCTTAATCTTAATGATGCAGACATGGCCTTATTTCTTTCATCTATT
ATTCTATCTGCAGATCGACCTGGTTTATCAGAAAGCTCAAAAATTGAAAATGCCCAACTT
AATGTTCTGATGGCCTTGCAGTTGCAATTGTCATTGTCGCATCCTGACAAACCCAGGTAG

InterProScan

ProSiteProfiles
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[250-439] 13.566
SUPERFAMILY
NHR_like_dom_sf (IPR035500) - T[325-438] 2.88E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PPARG_HUMAN 41.228 % 87 2.3E-18
PPARD_HUMAN 32.353 % 88.2 6.44E-19
PPARA_HUMAN 40.351 % 85.5 6.85E-18