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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.216.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S8...'
  3. Transcript 'KH2012:KH.C2.216.v2....'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S146.g04158.01.t

Possible name(s)

DLL1; NOTCH2; SNED1

Location

S146 [31,943 / 37,858]

Sequences

Amino acid sequence

Length: 493

>Phmamm.CG.MTP2014.S146.g04158.01.p
MFVHFRGDFTCLIVNNSSDQKCVPKCRDPEDCLELTNGETMCNYGRMVLHFCDSQPCRNG
ATCSERKNLIGINVGFRCQCTPQWVGVICDRPKSDACTPDPCQNGCKCMPSCRHERGYQC
VGEETGYIGTNCDIAEISTNGDVQLRISLPFIGQCGTRMGNDSVAGGIVFENRIWINRNT
NLKIDMPVPVLDFSCVYARQYDIMSSLEPLTDPNVVKIVRSGSFEANVEMCKISSCPQKC
PTQYQVLNEAVYTIGEMIHVRINVETNQKLLNQPDLVLTVEDIFLSCSSDIFMPEFAQIV
AETSSCPGNPGFPFSVTSGQIASPHSVCLSFQVPKAANCDLFFLHARLSLCAAVNVKSCE
HPNFAYCASRSKRSSDDHDVMSNDVTYTFIGPIHILRGSRGRKIEQLLIDGQPGNVVTFT
DDKDPDDYPSTPPTNRHSGGKSDESFPRLGNMRNRYDEFHYFCFLFHSSMEIKSPHVGAR
DLNTVVVKQQSSC

Nucleotide sequence

Length: 1,482

>Phmamm.CG.MTP2014.S146.g04158.01.t
ATGTTTGTGCATTTCAGGGGTGATTTCACCTGCTTAATTGTCAATAATTCTTCAGACCAG
AAGTGCGTCCCCAAGTGTCGCGATCCAGAGGATTGCCTCGAATTGACGAATGGTGAAACG
ATGTGCAACTATGGGAGAATGGTTCTGCACTTCTGTGATTCCCAACCTTGTAGAAACGGA
GCGACATGTTCGGAGAGGAAAAATCTGATCGGGATTAATGTTGGTTTCAGGTGTCAGTGT
ACTCCACAGTGGGTTGGGGTGATTTGTGACAGACCGAAATCCGATGCTTGCACCCCTGAT
CCATGTCAGAACGGGTGCAAGTGCATGCCATCTTGTAGACACGAGAGAGGTTATCAATGT
GTAGGGGAAGAAACCGGATACATCGGAACCAATTGCGACATCGCCGAGATTTCCACCAAT
GGCGATGTCCAACTAAGAATAAGTCTCCCTTTCATCGGTCAATGCGGTACCCGAATGGGA
AACGATTCAGTAGCGGGAGGAATCGTTTTCGAGAACCGGATCTGGATAAACCGAAACACA
AATTTGAAAATCGATATGCCGGTTCCGGTTCTCGATTTCAGCTGCGTCTACGCGCGTCAG
TACGATATTATGTCGTCTTTAGAACCACTAACCGACCCAAACGTGGTGAAAATAGTTCGA
AGTGGAAGTTTCGAAGCGAACGTTGAAATGTGCAAGATTTCATCCTGTCCACAAAAATGT
CCAACTCAATACCAAGTATTGAATGAAGCTGTTTACACGATTGGTGAAATGATACATGTT
CGCATAAATGTCGAAACTAATCAGAAGCTACTTAATCAGCCCGATCTGGTTCTCACTGTG
GAGGACATCTTCCTCTCGTGTTCGTCCGACATTTTTATGCCTGAATTCGCACAAATCGTC
GCTGAAACTTCTAGTTGTCCAGGAAATCCCGGTTTTCCTTTCTCGGTCACTTCCGGACAA
ATCGCTTCCCCTCATTCGGTTTGTCTTTCCTTCCAGGTTCCCAAAGCGGCCAATTGCGAT
TTATTTTTCCTCCATGCAAGACTTTCTCTCTGTGCTGCCGTTAATGTGAAGTCGTGTGAA
CATCCGAACTTCGCATACTGCGCGTCTCGCTCCAAGCGCTCATCCGATGATCATGACGTC
ATGAGTAATGACGTAACTTACACGTTCATCGGCCCCATCCACATTCTGCGAGGTTCGAGA
GGGCGAAAAATCGAACAACTCCTCATCGATGGTCAACCCGGGAATGTGGTTACGTTTACG
GACGATAAGGATCCGGACGATTATCCTTCCACTCCTCCGACAAACAGGCATAGCGGAGGT
AAATCTGATGAGAGTTTTCCTCGTCTTGGGAATATGCGCAATCGCTACGACGAGTTTCAT
TATTTTTGCTTTTTATTTCATTCGTCGATGGAAATCAAATCGCCGCACGTTGGCGCTAGA
GACCTAAACACCGTCGTTGTCAAACAGCAAAGTTCCTGTTGA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[48-90] 14.553
SMART
EGF-like_dom (IPR000742) - T[51-90] 0.002 - T[96-133] 250.0
ProSitePatterns
EGF-like_CS (IPR013032) - T[78-89] .
ProSiteProfiles
ZP_dom (IPR001507) - T[96-374] 13.454

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value