- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L92.4.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S147...' >
- Transcript 'KH2012:KH.C3.424.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1442.g14806.01.t
Possible name(s)
NHLRC2; TRIM3; TRIM71
Gene model
Location
S1442 [30,245 / 34,419]
Amino acid sequence
Length: 438
>Phmamm.CG.MTP2014.S1442.g14806.01.p
MEGIVTTIAGGGYPHVGHVDTCTDGPSSVDGPLAQSRFNYPWGITFDSESGSLFVADCGC
PEVTGSNDRIRKIDLHTDVVTTLAGSKQGYKDGIGTAANFFHSAGMAINRQGDVLYIADS
GNNVIRSLDLSTNRASTFAGDTTCGFVDGAIEKARFCNPQALKFVPSKQILYVADTDNHA
IRLISLSGIKSTKTVTGGPQQKGFKDGSLATAKWQHPTSMAYDEIDDVMYVSDHYNHALR
LIDFKTGDVSTLLGNGVATSVRQRALNHKSPLGGALYYPEGLALDRDNQVLYIVEFGNNC
VSMYSLRDRTLRILAGGTSYGTRDAIGADAQFYHPTNMDFDGVNKVLYVTDQYNHRVRAV
SSLGSQQLASSNQMKMQHLVKVDAYRDLIVHNRSTVAAFVYVIMVALLCGVLFCTRRRWM
AFIKVKYAIYNKQYQSRL
Nucleotide sequence
Length: 1,317
>Phmamm.CG.MTP2014.S1442.g14806.01.t
ATGGAAGGGATCGTCACAACTATCGCCGGGGGAGGGTACCCACACGTTGGTCACGTGGAT
ACATGCACTGATGGACCCTCCTCAGTGGACGGGCCTCTCGCTCAGTCAAGGTTTAACTAC
CCTTGGGGAATCACCTTCGACAGCGAAAGCGGTTCGCTCTTTGTCGCCGATTGTGGTTGT
CCTGAAGTAACCGGTAGCAACGACAGAATAAGGAAAATTGACCTCCACACTGATGTCGTC
ACAACACTTGCTGGATCCAAGCAGGGTTACAAAGACGGCATCGGGACAGCGGCAAATTTC
TTCCACTCCGCTGGAATGGCGATCAACCGACAAGGGGATGTGCTCTATATCGCCGACAGT
GGCAACAATGTAATCAGGAGCTTGGACCTTTCGACCAATCGGGCATCGACGTTTGCTGGT
GATACCACGTGTGGTTTTGTTGATGGCGCAATTGAAAAAGCTAGATTTTGCAACCCACAA
GCGTTGAAGTTCGTCCCTTCGAAGCAAATCCTCTACGTAGCGGACACAGACAATCACGCT
ATCAGGCTCATTTCTCTAAGCGGAATAAAATCAACAAAAACGGTCACCGGTGGACCGCAG
CAGAAAGGGTTCAAGGACGGGTCACTCGCTACAGCGAAGTGGCAACATCCTACCTCAATG
GCTTATGACGAAATCGATGACGTCATGTACGTTTCGGACCACTACAACCACGCGTTACGC
TTGATTGATTTCAAGACGGGCGACGTGTCTACGTTGCTTGGAAACGGCGTAGCAACGTCT
GTCCGACAGAGGGCGCTAAACCACAAATCGCCATTGGGTGGCGCTCTTTACTACCCGGAA
GGTCTAGCTTTGGACAGAGACAACCAGGTTCTTTACATCGTCGAATTCGGCAACAACTGT
GTTAGTATGTATTCCTTACGCGACCGCACCCTGCGCATTTTGGCCGGCGGAACCAGTTAT
GGAACACGCGACGCGATAGGGGCCGACGCCCAATTCTACCACCCGACAAATATGGACTTC
GATGGCGTCAATAAGGTACTTTACGTCACTGACCAGTACAACCACCGCGTGAGGGCGGTG
TCGAGCCTCGGAAGCCAACAGCTGGCGAGTTCTAATCAAATGAAAATGCAGCATTTGGTG
AAAGTCGATGCCTATCGCGATTTGATTGTTCATAACCGCTCGACCGTGGCAGCGTTTGTG
TACGTCATAATGGTTGCTCTGTTGTGTGGAGTATTGTTCTGCACCCGTCGGAGGTGGATG
GCTTTCATCAAAGTGAAGTACGCCATTTACAACAAGCAATATCAATCAAGGCTTTAG
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[1-63] 3.9E-9 - T[64-131] 5.4E-16 - T[132-246] 1.1E-25 - T[274-361] 3.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NHLC2_HUMAN | 26.562 % | 102 | 2.98E-23 |