Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S143.g04108.02.t

Possible name(s)

SLC10A1; SLC10A2; SLC10A4

Gene model

Phmamm.CG.MTP2014.S143.g04108

Location

S143 [45,119 / 49,334]

Sequences

Amino acid sequence

Length: 427

>Phmamm.CG.MTP2014.S143.g04108.02.p
MVTANQSLGGVSSANISGRVTVRFTPDGIPITDFSNDPEKLAMDTAIKWLSICILIEVML
GMGSTVDIHTLKDHIRRPVGVGIAAFTQFIVMPLLVFGVASAAQIHTVAAVTILITASVP
GGSLSNILTYLIEGDIALSMLMTACSSVLAFAFIPFNLFVYGSHWLPADTDYANLIPYPS
VILSLILMMLPVTLGVGINWKWPNLAKHIVTTCKILLAMTIVALAILSGLLYEDTLLRYM
PKEMWIFCVFMPLVGYGLGFLFASCARLDSIHRRTVAIESGCQNGQLGCAILKVAFPNQL
IGSFFIFPLLYSVFQLSEGLMLVAFFRYRNRRRNDNEKDESAFLTSRAMYRIRTVSLHVI
DKMREKAKRSGSSGDCEKPVIREDTTDTSNETKEDSSSTDPELSEEFSSVPSGRANPVFE
LESTESS

Nucleotide sequence

Length: 1,284

>Phmamm.CG.MTP2014.S143.g04108.02.t
ATGGTGACAGCAAATCAAAGTTTAGGCGGTGTTTCTTCAGCCAATATTAGTGGACGGGTT
ACAGTGAGGTTTACACCTGATGGAATACCTATCACTGACTTCTCAAACGACCCAGAGAAA
TTAGCGATGGACACAGCTATCAAATGGTTGTCAATCTGCATTCTAATTGAAGTCATGCTT
GGAATGGGCTCTACTGTTGATATCCATACTCTGAAAGATCATATTCGCCGACCAGTTGGT
GTTGGAATCGCTGCTTTTACTCAGTTCATTGTTATGCCTCTGCTGGTTTTCGGTGTTGCT
TCAGCTGCTCAGATACACACTGTAGCTGCTGTCACTATTCTCATCACAGCAAGCGTTCCA
GGCGGTAGCCTCTCCAATATTCTCACCTATCTGATTGAAGGGGATATAGCTCTCAGTATG
CTGATGACTGCTTGTTCATCGGTTCTGGCATTTGCGTTCATTCCCTTCAACTTATTTGTG
TATGGATCCCACTGGTTGCCAGCTGACACCGACTATGCAAATCTCATCCCCTATCCCTCT
GTGATACTTTCGCTAATCCTGATGATGCTCCCTGTTACTTTAGGTGTTGGAATCAACTGG
AAGTGGCCCAATCTCGCCAAACACATTGTTACGACATGCAAGATTCTACTGGCGATGACC
ATTGTTGCGCTGGCTATACTTTCCGGTTTGCTGTACGAAGACACCCTTTTGCGATACATG
CCCAAGGAGATGTGGATCTTTTGCGTCTTCATGCCACTAGTCGGATATGGTCTTGGATTT
CTATTTGCTTCGTGTGCCAGACTGGATAGCATTCATCGTCGAACGGTGGCAATAGAGAGT
GGATGTCAGAATGGTCAACTTGGATGTGCAATCCTAAAAGTCGCCTTTCCCAACCAGCTA
ATCGGAAGCTTCTTCATTTTTCCACTACTCTACTCTGTCTTTCAGCTTTCCGAGGGGCTA
ATGCTCGTCGCCTTCTTTCGCTACCGAAATCGCCGACGTAATGACAACGAGAAAGATGAA
TCAGCGTTTCTTACCAGCAGAGCCATGTACAGAATCCGCACGGTGTCGTTGCACGTGATA
GATAAAATGAGAGAAAAGGCAAAACGGTCCGGATCATCCGGTGATTGCGAGAAGCCAGTA
ATAAGAGAGGACACCACGGATACTAGTAACGAAACCAAAGAAGATTCCAGCTCTACAGAC
CCGGAATTAAGTGAAGAATTTTCATCCGTTCCATCAGGAAGAGCAAATCCCGTTTTTGAA
TTGGAATCCACTGAATCATCTTGA

InterProScan

PANTHER	Bilac:Na_transpt (IPR004710) - T[39-340] 8.0E-102
PANTHER	SLC10A1 (IPR030208) - T[39-340] 8.0E-102
Pfam	BilAc:Na_symport/Acr3 (IPR002657) - T[54-226] 3.0E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NTCP_HUMAN	32.154 %	195	9.06E-59
NTCP2_HUMAN	36.364 %	190	9.67E-57
NTCP4_HUMAN	35.756 %	194	2.1E-57