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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R54....' > 
  2. Clone 'man11m10' > 
  3. Transcript 'KH2012:KH.L123.1.v1....' > 
  4. Transcript 'KH2012:KH.C5.42.v2.A...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S143.g04108.01.t

Possible name(s)

SLC10A1; SLC10A2; SLC10A4

Gene model

Phmamm.CG.MTP2014.S143.g04108

Location

S143 [45,038 / 49,653]

Sequences

Amino acid sequence

Length: 439

>Phmamm.CG.MTP2014.S143.g04108.01.p
MAAEAVDIIETKMVTANQSLGGVSSANISGRVTVRFTPDGIPITDFSNDPEKLAMDTAIK
WLSICILIEVMLGMGSTVDIHTLKDHIRRPVGVGIAAFTQFIVMPLLVFGVASAAQIHTV
AAVTILITASVPGGSLSNILTYLIEGDIALSMLMTACSSVLAFAFIPFNLFVYGSHWLPA
DTDYANLIPYPSVILSLILMMLPVTLGVGINWKWPNLAKHIVTTCKILLAMTIVALAILS
GLLYEDTLLRYMPKEMWIFCVFMPLVGYGLGFLFASCARLDSIHRRTVAIESGCQNGQLG
CAILKVAFPNQLIGSFFIFPLLYSVFQLSEGLMLVAFFRYRNRRRNDNEKDESAFLTSRA
MYRIRTVSLHVIDKMREKAKRSGSSGDCEKPVIREDTTDTSNETKEDSSSTDPELSEEFS
SVPSGRANPVFELESTESS

Nucleotide sequence

Length: 1,684

>Phmamm.CG.MTP2014.S143.g04108.01.t
TGTTGATTGCGTATGAACCCTTGACTTTTTGTGTAGGCCACTAACATGGCGGCAGAAGCT
GTTGATATAATTGAAACGAAAATGGTGACAGCAAATCAAAGTTTAGGCGGTGTTTCTTCA
GCCAATATTAGTGGACGGGTTACAGTGAGGTTTACACCTGATGGAATACCTATCACTGAC
TTCTCAAACGACCCAGAGAAATTAGCGATGGACACAGCTATCAAATGGTTGTCAATCTGC
ATTCTAATTGAAGTCATGCTTGGAATGGGCTCTACTGTTGATATCCATACTCTGAAAGAT
CATATTCGCCGACCAGTTGGTGTTGGAATCGCTGCTTTTACTCAGTTCATTGTTATGCCT
CTGCTGGTTTTCGGTGTTGCTTCAGCTGCTCAGATACACACTGTAGCTGCTGTCACTATT
CTCATCACAGCAAGCGTTCCAGGCGGTAGCCTCTCCAATATTCTCACCTATCTGATTGAA
GGGGATATAGCTCTCAGTATGCTGATGACTGCTTGTTCATCGGTTCTGGCATTTGCGTTC
ATTCCCTTCAACTTATTTGTGTATGGATCCCACTGGTTGCCAGCTGACACCGACTATGCA
AATCTCATCCCCTATCCCTCTGTGATACTTTCGCTAATCCTGATGATGCTCCCTGTTACT
TTAGGTGTTGGAATCAACTGGAAGTGGCCCAATCTCGCCAAACACATTGTTACGACATGC
AAGATTCTACTGGCGATGACCATTGTTGCGCTGGCTATACTTTCCGGTTTGCTGTACGAA
GACACCCTTTTGCGATACATGCCCAAGGAGATGTGGATCTTTTGCGTCTTCATGCCACTA
GTCGGATATGGTCTTGGATTTCTATTTGCTTCGTGTGCCAGACTGGATAGCATTCATCGT
CGAACGGTGGCAATAGAGAGTGGATGTCAGAATGGTCAACTTGGATGTGCAATCCTAAAA
GTCGCCTTTCCCAACCAGCTAATCGGAAGCTTCTTCATTTTTCCACTACTCTACTCTGTC
TTTCAGCTTTCCGAGGGGCTAATGCTCGTCGCCTTCTTTCGCTACCGAAATCGCCGACGT
AATGACAACGAGAAAGATGAATCAGCGTTTCTTACCAGCAGAGCCATGTACAGAATCCGC
ACGGTGTCGTTGCACGTGATAGATAAAATGAGAGAAAAGGCAAAACGGTCCGGATCATCC
GGTGATTGCGAGAAGCCAGTAATAAGAGAGGACACCACGGATACTAGTAACGAAACCAAA
GAAGATTCCAGCTCTACAGACCCGGAATTAAGTGAAGAATTTTCATCCGTTCCATCAGGA
AGAGCAAATCCCGTTTTTGAATTGGAATCCACTGAATCATCTTGATCTGCACCTCAATAA
TGTAAACTTTGGTTGCAAGCGTTTTGGCCCAACTTGTAACTTGCAACTTATTGTGTTCTT
GCTTTAAATGATAAGACAAGACCGAAAATGAAGCCTTTTATCGAAAGTGCTGATCTTCGT
CTTGACATCACAAAAACGATTTTATAGAATCAGACTCGAGCTACTTTTTATCATATAACA
ATGACTTTTTCGCAAACCTAGTGAATTCCATTTCTGCGCATGCGTTTAATAGTTGTATTG
TTTCGAAAATGTATGTGTTCAATATTGAATCAAATCGCATGCAAAACCACATAAATGTTG
CGGA

InterProScan

PANTHER
SLC10A1 (IPR030208) - T[51-352] 8.7E-102
PANTHER
Bilac:Na_transpt (IPR004710) - T[51-352] 8.7E-102
Pfam
BilAc:Na_symport/Acr3 (IPR002657) - T[66-238] 2.8E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NTCP_HUMAN 32.468 % 195 1.11E-58
NTCP2_HUMAN 36.364 % 190 1.15E-56
NTCP4_HUMAN 35.756 % 194 3.52E-57