- Transcript 'Cisavi.CG.ENS81.R133...' >
- Transcript 'Boleac.CG.SB_v3.S547...' >
- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'KH2012:KH.C9.53.v9.B...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S13.g00576.01.t
Possible name(s)
ISL1; ISL2; LHX9
Gene model
Location
S13 [267,283 / 270,762]
Amino acid sequence
Length: 295
>Phmamm.CG.MTP2014.S13.g00576.01.p
MRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKADHEVVAAGEMIGRHDPHHLPG
FPPGGNGPNGIVSPPVMGRMNGSSNSDQGKSGHRSGAKRKDGKTTRVRTVLNEKQLHTLR
TCYAANCRPDALMKEQLTEMTGLSSRVIRVWFQNKRCKDKKRSIALKHMQEQQAKQQQQQ
SGDQSGSNGGQGLSGMNGVPMVASEPVRNDVAVANTVEVQNYQQPAWKALSDFALQSEIE
QPAFQQLVSNFSDHNQSSMSDSEISSIPSVSSAGHEPGNHCSTPLTVESHMTACS
Nucleotide sequence
Length: 888
>Phmamm.CG.MTP2014.S13.g00576.01.t
ATGCGGGCGCGGGACAAGATCTACCACATCCAGTGCTTCAAGTGCGTGGCGTGCAGTCGA
CAACTGATTCCGGGCGACGAGTTCGCTTTGCGGGACGACGGGCTCTTCTGCAAGGCGGAC
CACGAAGTTGTTGCGGCAGGCGAAATGATAGGCCGACACGACCCTCACCACTTGCCAGGG
TTTCCTCCGGGCGGCAACGGCCCCAACGGCATCGTCAGTCCGCCAGTGATGGGCAGAATG
AACGGGTCTTCCAACAGCGACCAGGGAAAAAGCGGACATCGCAGTGGCGCAAAACGGAAA
GATGGCAAAACGACACGAGTGCGGACCGTGCTGAACGAGAAACAACTGCACACGTTGAGA
ACTTGTTACGCCGCAAACTGTCGACCTGATGCCCTCATGAAAGAACAACTGACCGAAATG
ACCGGTCTCTCCTCGCGAGTCATCCGCGTCTGGTTTCAAAACAAACGTTGCAAGGACAAG
AAAAGATCAATCGCCTTAAAACACATGCAAGAACAACAAGCAAAACAACAACAGCAACAA
TCCGGCGACCAGAGTGGATCGAACGGTGGTCAAGGTTTATCGGGAATGAATGGCGTTCCA
ATGGTTGCATCCGAGCCAGTACGAAACGACGTGGCAGTTGCCAATACTGTTGAGGTGCAA
AATTACCAGCAACCAGCATGGAAAGCACTCAGCGACTTCGCCCTGCAGAGTGAAATCGAA
CAACCGGCATTTCAACAACTGGTCAGCAATTTCTCCGATCATAACCAAAGCTCAATGTCG
GACTCGGAGATCAGCAGCATTCCCTCTGTTTCCTCAGCTGGCCATGAACCAGGCAACCAC
TGTTCGACGCCCCTTACCGTTGAATCACATATGACCGCCTGCAGCTAG
| Pfam |
Znf_LIM (IPR001781) - T[1-41] 1.4E-10 |
| SMART |
Znf_LIM (IPR001781) - T[1-40] 0.0028 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[1-47] 10.415 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[89-162] 4.28E-17 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[102-162] 15.354 |
| SMART |
Homeobox_dom (IPR001356) - T[104-166] 1.6E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[106-161] 5.3E-15 |
| CDD |
Homeobox_dom (IPR001356) - T[106-163] 1.32097E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ISL1_HUMAN | 57.565 % | 278 | 7.87E-93 |
| ISL2_HUMAN | 51.449 % | 253 | 1.14E-82 |
| LHX9_HUMAN | 32.584 % | 97.1 | 6.29E-23 |