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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S49...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. EST 'AHC0AAA224YN21_RM1' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S139.g04033.03.t

Possible name(s)

EIF3M; PSMD13

Gene model

Phmamm.CG.MTP2014.S139.g04033

Location

S139 [118,646 / 123,654]

Sequences

Amino acid sequence

Length: 376

>Phmamm.CG.MTP2014.S139.g04033.03.p
MNVPAFIDLSESDQVNELRQYFNSRDVKIEETAPEDLFGAVKSIINATSKIWNETDPKDI
EGIVNSILSLLFIIPLNQGKELVDLLCEQLLAGRAEAGKNALSMKLLHNLFHGYQIKTPF
LYKVYCTWIKVAGLSGSLHLLPTNLKEVNTWLEYWDAGEEGRQNLYRLLYQAHYKCGSSD
EAAETMIRLLEGYTDDNAAQARDDAIKCITRAIADQNTYLFDQLLTLKPVNFLEGELIYD
LLNIFVSGNVNDYKEFYASNNKFFQNLGLSHESNLRKIQLLTLVDIVGVSREIGFDEIVN
KLGLSHSEVEDFVIDAMQSKLIRARIDHVNRKILVSQACQRTFGRPQWQILHTRLQQWKD
NLKRVNEKLSTVSTHA

Nucleotide sequence

Length: 1,275

>Phmamm.CG.MTP2014.S139.g04033.03.t
GCAGTTTTGGTTTTTCTACATTTTGTGGTCGTCGTTTGCTATTTGACAATAAACAATGAA
TGTTCCAGCTTTCATAGATTTGTCCGAATCCGATCAGGTTAATGAGTTGCGTCAATACTT
CAACAGTCGGGATGTAAAAATTGAAGAAACTGCTCCTGAGGATCTCTTTGGTGCAGTAAA
GTCTATTATTAATGCCACATCCAAAATATGGAATGAAACTGATCCAAAAGACATTGAGGG
AATTGTGAACAGCATTTTGTCTCTTCTTTTTATTATTCCATTAAATCAAGGCAAGGAATT
AGTGGATTTATTATGTGAACAACTTCTTGCTGGAAGAGCAGAAGCTGGAAAAAATGCTCT
TAGCATGAAACTATTGCACAACCTGTTTCATGGATATCAAATTAAGACTCCCTTCCTTTA
CAAGGTTTACTGCACTTGGATAAAAGTAGCAGGTCTCTCAGGGAGTCTGCATCTTCTTCC
AACCAATCTGAAGGAGGTGAACACTTGGCTTGAATACTGGGATGCGGGTGAAGAAGGACG
TCAAAACTTGTACAGGTTGTTATACCAGGCTCACTATAAATGTGGATCTTCCGACGAAGC
GGCTGAAACAATGATACGACTACTGGAAGGGTATACAGATGACAATGCAGCACAAGCAAG
GGATGATGCTATTAAATGCATTACAAGGGCTATTGCAGACCAGAACACTTACCTTTTCGA
CCAACTTCTCACATTAAAACCTGTGAATTTTCTTGAAGGAGAACTCATTTATGATCTTTT
GAATATATTCGTCAGTGGAAATGTAAATGATTACAAAGAGTTTTATGCCTCAAACAACAA
ATTCTTTCAAAACTTAGGGTTATCACATGAAAGCAATCTCAGAAAGATTCAACTTCTTAC
ATTGGTTGACATTGTTGGTGTTTCTCGTGAAATTGGTTTTGATGAAATTGTGAACAAACT
TGGATTGTCACATTCTGAAGTTGAGGATTTTGTGATTGATGCAATGCAAAGCAAACTTAT
TCGTGCCAGGATTGATCATGTCAACCGAAAAATACTCGTCAGTCAAGCATGTCAGCGAAC
GTTTGGGCGCCCCCAGTGGCAGATTTTGCACACTAGATTGCAACAATGGAAAGACAACTT
GAAACGAGTCAATGAGAAGCTATCTACAGTTTCAACACACGCATAAATTTTGTGTGTTTG
TATCGTTGTTGCATTTGAAATTTGTGGTGGATGAAGGTTGAGAAAAACAGAGACAGAAAC
GGCCCGTTGTTTTTT

InterProScan

Hamap
eIF3m (IPR027528) - T[1-375] 22.217
ProSiteProfiles
PCI_dom (IPR000717) - T[178-340] 18.268
Pfam
PCI_dom (IPR000717) - T[239-336] 2.8E-14
SMART
PCI_dom (IPR000717) - T[269-358] 9.8E-15
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[276-336] 5.17E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3M_HUMAN 45.455 % 335 1.38E-113