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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA57YJ22' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  3. Clone 'ciht003b03' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1356.g14580.01.t

Possible name(s)

Phmamm.CG.MTP2014.S1356.g14580

Gene model

Phmamm.CG.MTP2014.S1356.g14580

Location

S1356 [3,261 / 5,970]

Sequences

Amino acid sequence

Length: 902

>Phmamm.CG.MTP2014.S1356.g14580.01.p
MGSLARREITPYSDFENIIVLEETVGSISPVLAYFQWFATVFQIILVRLGETILRFLAIP
CLNNPLVSEENWFYDAYTPCGICPDGFAPQASKNPLGRQTMTKKKPWITELIKPVSQMVK
YLDAAQDIKNGYHLADMLTTTCFVYGNYVVYHDFENKVKQKTNNLPIFTEKTEESMVKDF
EQYSVASSCVGHALNIKRFAFRSCSLFIIGLGRLHDCKFSNCFEIVDKLRERRIIDTSLQ
RKLQFSLSVACEMRLRIYNQASSQSDILHQTINLNIPSCITNIATCIGPKALVSGLSIAN
ILQMYVMSCFKVCTRYDPSSIVERPIDAALLAGSMKLHRLAIKLVHECQDIDVYKNKKHQ
VVLLRVFTFSLHGCEEYKKCIDVIEANLPMMKEIGLINEACLLMMTCARSLVDSKKFKKA
LKYYRKVNFYHFFKLANSVTNVQINIGMGDCFKKLWRNQKALKYLKLAYNEVIDNPKKKV
DDEYNELLMHYCVCLNRSRKWDEAKAVGEELLKIRRSLHVDKESDLLTNFALLQIGTCFV
YQKRYEEAIGYLKQSWQCEGIRKDFCQDTSAGCVRQMAICLQQLGRSFEAINLIQAYLIN
NNDRNITVLGEHSIIDILTVILRWCGLFEACSLYNNSIVRDYKRMKQTKQTCKMMKFFQG
QNQHLQQTNNHYDQHHIDDETIQKFQREPKIEIFHLLRLGSSLLKRRSIEEALNCYDKIE
RLLMKIKMGSFMSEDVEFHSMVYHEISYCLLMERYFQQQIKYSKKAFHLSFYVPGARFSD
TSIDAAVMLGQNLYALKRYAESLVAAWHAIKFCLHVYPNCSYISKFMQAVVLYSDCEAAL
GMMVSSLPFHCAPSIFYNVPRRYTLLQTDAKHDNTLGTLLTPCKIQKIVITNDLDRFLFN
RF

Nucleotide sequence

Length: 2,709

>Phmamm.CG.MTP2014.S1356.g14580.01.t
ATGGGCTCATTAGCCAGGAGGGAAATAACTCCATATTCTGACTTTGAAAACATTATTGTT
TTAGAAGAAACAGTTGGATCTATAAGTCCAGTACTAGCATACTTTCAATGGTTTGCAACG
GTTTTCCAAATCATCTTGGTCAGGTTAGGGGAGACAATATTACGTTTTTTAGCTATTCCA
TGCCTTAACAATCCTTTAGTCTCAGAAGAAAATTGGTTTTATGATGCTTACACTCCATGT
GGAATATGTCCGGATGGGTTTGCTCCTCAAGCTAGTAAGAATCCTTTAGGAAGACAAACA
ATGACAAAGAAAAAACCTTGGATCACCGAACTTATCAAACCAGTCTCCCAGATGGTAAAG
TACTTGGATGCGGCTCAGGATATTAAAAACGGTTATCACTTGGCTGATATGCTGACGACC
ACTTGCTTCGTTTATGGAAATTATGTGGTATATCATGACTTTGAAAATAAAGTGAAACAA
AAAACTAATAATTTGCCAATATTTACTGAAAAGACAGAAGAAAGTATGGTGAAGGACTTC
GAACAGTATTCAGTGGCATCTAGCTGTGTAGGACATGCTTTGAATATTAAACGTTTTGCT
TTTAGAAGCTGTTCACTTTTTATTATTGGACTGGGCCGTTTGCATGACTGCAAGTTTTCA
AACTGTTTTGAGATCGTTGACAAACTGCGGGAACGAAGAATTATTGACACTTCACTTCAG
AGGAAACTGCAATTTTCATTATCAGTTGCATGTGAAATGCGTCTGAGAATCTACAACCAA
GCTTCCAGTCAAAGCGACATTTTACATCAAACAATAAATCTTAATATCCCATCTTGTATA
ACCAACATAGCGACATGTATAGGCCCTAAAGCATTGGTAAGTGGACTAAGCATTGCAAAC
ATACTACAAATGTATGTTATGTCATGTTTTAAGGTATGTACTCGTTATGATCCCAGTTCG
ATTGTAGAAAGACCAATTGATGCAGCGTTGCTTGCCGGTTCAATGAAGTTACATAGACTT
GCAATCAAGTTAGTACATGAATGTCAGGATATCGATGTATACAAGAACAAAAAACATCAA
GTTGTCTTGCTACGTGTGTTCACATTCAGTTTGCATGGGTGTGAGGAGTATAAAAAGTGT
ATTGATGTCATAGAAGCAAACCTTCCAATGATGAAAGAAATTGGCTTAATTAATGAAGCA
TGCCTATTAATGATGACCTGCGCCCGTAGCTTAGTGGATTCCAAAAAATTCAAAAAAGCC
CTGAAATATTACAGAAAAGTTAATTTTTATCACTTTTTTAAACTTGCCAATTCTGTCACA
AATGTGCAGATTAACATTGGAATGGGCGACTGTTTCAAAAAACTATGGCGAAACCAGAAA
GCCTTGAAATATTTAAAACTGGCTTACAATGAGGTCATAGACAACCCAAAAAAGAAAGTT
GATGATGAATATAATGAATTGCTGATGCATTATTGTGTATGTCTGAATCGTTCACGAAAA
TGGGATGAAGCAAAAGCAGTAGGTGAAGAACTATTAAAAATCAGACGAAGCCTTCATGTC
GACAAAGAATCAGACCTATTAACCAACTTTGCACTCCTTCAGATAGGTACTTGTTTTGTT
TACCAAAAGAGATATGAGGAAGCTATTGGGTACTTGAAACAATCTTGGCAGTGTGAAGGT
ATTAGGAAAGACTTTTGTCAGGACACAAGTGCTGGGTGCGTAAGGCAAATGGCCATATGC
TTGCAACAGTTGGGAAGATCTTTTGAAGCAATTAACTTGATTCAAGCATATTTAATAAAT
AACAACGATCGCAATATTACTGTTTTGGGCGAACACAGTATAATCGACATTTTAACTGTC
ATTTTGCGATGGTGTGGCTTATTTGAAGCATGTAGTTTGTACAACAACAGTATTGTACGT
GATTATAAGCGAATGAAGCAAACAAAACAGACCTGTAAGATGATGAAGTTTTTCCAGGGT
CAAAATCAACATCTCCAACAAACCAATAATCATTACGACCAGCATCACATTGATGATGAA
ACAATACAAAAATTTCAAAGGGAACCTAAAATCGAAATATTTCATCTGCTCAGACTAGGA
AGCAGTCTTTTAAAACGCCGAAGCATCGAAGAAGCCTTAAATTGTTACGACAAAATCGAA
AGGCTTCTTATGAAGATTAAAATGGGATCGTTTATGTCGGAAGATGTTGAGTTTCACAGC
ATGGTTTATCATGAAATTTCCTACTGTCTCCTCATGGAGCGCTATTTTCAACAACAAATC
AAATACTCAAAGAAGGCTTTTCATCTTTCTTTTTATGTACCAGGAGCAAGATTTTCTGAC
ACAAGTATAGATGCGGCGGTTATGCTTGGTCAAAATTTATATGCTTTGAAACGATATGCT
GAGAGTCTTGTTGCAGCATGGCATGCTATAAAGTTTTGTCTACATGTGTATCCCAACTGC
AGCTACATTTCCAAATTTATGCAAGCCGTTGTACTGTATTCTGATTGCGAGGCAGCGTTA
GGCATGATGGTTTCTTCTCTTCCATTTCATTGTGCCCCATCTATTTTTTACAATGTACCC
CGTCGATATACGCTTTTACAGACTGATGCAAAACACGACAACACGTTGGGTACCTTGCTG
ACACCATGTAAAATTCAAAAAATAGTTATTACAAACGATTTGGATCGATTTCTTTTTAAC
AGATTTTAG

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[342-521] 6.4E-9 - T[522-608] 3.9E-5 - T[688-834] 2.0E-6
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[377-602] 9.7E-14 - T[688-822] 2.0E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value