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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1319.g14472.01.t

Possible name(s)

RPL4

Gene model

Phmamm.CG.MTP2014.S1319.g14472

Location

S1319 [30,984 / 37,285]

Sequences

Amino acid sequence

Length: 371

>Phmamm.CG.MTP2014.S1319.g14472.01.p
ARRRRRVDLGKSTMACARPLVSVYTEKGVPSETTVKLPAVFKAPIRPDVVNFVHTNISKN
HRQPYAVNRFAGEQTSAESWGTGRAVARIPRVRGGGTHRSGQAAFGNMCRGGRMYAPTKT
WRRWHRRCNIKQRRFAMCSALAASALPALVMSKGHKIDGIPEVPLVVEDKVQQYKKTKEA
VLLLKKLKAWEDIKKVMKSRRIRAGKGKMRNRRHTQKRGPCVIYDQDEGISRAFRNIPGI
TLISVDRLNLLKIAPGGHVGRFIIWTESALRRLDNIYGSWRKPSVEKSNFNLPMSKMTCT
DLSKILQSTEVKSALRAPKRGLSRRSAKKNPLKNIRVMLKLNPAAAAVKRAAMLMQEKRL
REKAEKNAKKA

Nucleotide sequence

Length: 1,940

>Phmamm.CG.MTP2014.S1319.g14472.01.t
AGCACGTCGGCGAAGGCGTGTGGATTTGGGTAAATCAACTATGGCTTGTGCACGTCCACT
TGTGTCTGTGTACACAGAGAAAGGTGTACCTTCTGAAACTACAGTAAAGCTTCCGGCGGT
GTTCAAAGCTCCAATTCGACCAGATGTTGTGAACTTTGTCCATACAAACATAAGCAAAAA
CCATCGGCAGCCGTATGCAGTGAACCGGTTTGCTGGAGAACAAACCAGTGCTGAGTCATG
GGGTACTGGCAGAGCTGTGGCTAGAATTCCAAGAGTAAGGGGTGGTGGTACCCATCGATC
AGGTCAGGCCGCTTTTGGCAACATGTGCCGTGGTGGCCGTATGTATGCTCCAACAAAAAC
CTGGAGACGTTGGCACAGACGCTGCAACATTAAGCAGAGGCGATTTGCAATGTGCTCTGC
TTTGGCTGCATCTGCCCTTCCAGCTTTAGTTATGTCCAAAGGACACAAGATAGATGGTAT
ACCAGAGGTTCCCCTGGTTGTTGAAGATAAAGTTCAACAATACAAAAAAACCAAGGAAGC
TGTTCTTTTGTTGAAAAAGTTGAAAGCATGGGAGGATATCAAGAAGGTCATGAAGTCAAG
GAGGATTCGTGCTGGTAAGGGTAAGATGCGAAATCGCAGACACACTCAGAAGCGCGGACC
TTGTGTGATTTATGATCAGGATGAAGGAATCTCCCGGGCGTTCAGAAATATACCAGGTAT
TACTCTGATTAGTGTGGATCGCCTCAATCTGCTCAAAATAGCCCCTGGTGGTCACGTTGG
ACGGTTCATTATTTGGACTGAAAGTGCACTGAGACGCTTGGACAATATTTATGGATCATG
GAGAAAGCCATCTGTTGAAAAATCTAACTTCAACCTTCCAATGTCCAAAATGACATGCAC
TGATTTAAGCAAGATCCTTCAATCTACGGAAGTGAAGTCTGCTCTCCGTGCACCAAAACG
TGGTCTAAGCCGTCGTTCGGCAAAGAAGAACCCACTGAAAAACATCCGTGTCATGTTGAA
GTTGAATCCAGCTGCTGCAGCTGTGAAGCGTGCAGCAATGTTGATGCAGGAAAAACGACT
TCGCGAGAAGGCAGAGAAAAATGCCAAAAAAGCATAAACTTTGTGCTTGAAATAAAAATT
GTCAAAACTATATTGTGTGATCTATTACTGTTATTTAGTTGAGATATCTTACAATTTTTT
ATTTGCAAGCCCAAGTTTTTACCCAGAAAAGGCAATTTTTTAGGATTTTTTTTTAAAAAG
CTTTTTATCTTGTGATGTCAGTGAAATGCGCTCATTGATTTTTGACACTTTAGCCTAAGA
TCTCACTCGTATCAATTTCGACTAAAAAACAAACAAACTTTATTATATTCCATAAAAACA
CTTAAACACTTTTTATGTGACAACCAAGTTTGGTAAACCGAACACAACCATGTTACACCA
TGATGCATCAAGCTTTGTTACAATTTCTTCCATATCTGTATCCTCCGGTAGAGGTGTTTC
TACCAGTGGAGTTGCCACTGTGTTTACACTTTGGTTTCTGGATGGCATATCTTTTACAGC
AGCTTTTTGTTTAGCCTTGGCTTCTTTGCCCACTACAAACAAAAGTAATCACATTTTTAG
CATTGAGTATCAGGGACTTTACTTACCAACAAATATTGCAGATATAAGTTACCTACATTT
GTGATTCTGCAAAAAAATGCTAAAGTTAAATACAAAAAACATCAAAATTTACTTGGGGTG
ACAGGTGTTTCTTGTGCAGATGGTTCTGGCTTTTTCAATGTTGGATTTAGAATTTTTCTG
GCAGCTTGTCCTACCATGACACCATCCTCAAGTATTGATGACATCAAACCTTGTAACTTT
ACTGCATTATCTTCGGAGGTGGTATGCCATTGGTTAAGGCAAACACAGTTTGCTCCGCAC
AAGCTTAAAAGCATTGCAGT

InterProScan

Gene3D
Ribosomal_L4_dom_sf (IPR023574) - T[15-317] 5.5E-141
SUPERFAMILY
Ribosomal_L4_dom_sf (IPR023574) - T[20-275] 3.92E-83
Pfam
Ribosomal_L4/L1e (IPR002136) - T[35-274] 1.9E-40
Pfam
Ribos_L4_C_dom (IPR025755) - T[288-360] 1.0E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL4_HUMAN 72.238 % 511 0