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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1306.g14435.01.t

Possible name(s)

SLC6A1; SLC6A11; SLC6A13

Gene model

Phmamm.CG.MTP2014.S1306.g14435

Location

S1306 [30,282 / 33,860]

Sequences

Amino acid sequence

Length: 277

>Phmamm.CG.MTP2014.S1306.g14435.01.p
MEGISQAFYVYAIGFPGLTAFGSYNKKGQDFFKQSVFIIPCGMVTSIIMGFVTFSILGNL
AYTNNVEITSVIKSGPGLVFQVIPTALAQLPIPQLWSALFFLTLYFVAIDSAFGEFEGVI
TVIVDTFPKLGSTFKRRALTNCGVGLFFFSMCQIMLTGPGIYWFELMNYYGGSGICLIWI
VTCESLAVGWLWDARKYRHDVTMMVGRKLPRVFDYCYKFIVPVITVTVLIMYIIAWEPLT
IGDYVYPMWANVIGWMMSLSSILCVPIVAVVTLYKEK

Nucleotide sequence

Length: 1,034

>Phmamm.CG.MTP2014.S1306.g14435.01.t
GAACTTTAAATGCAAACACCTTACCCCGACTCTAATAGCCCTAACCGTGAGCATTTTTGG
AGATATAACGTTTAAAATGTGAAAAGGGTTCTTTGCGCCACCTGCCGAAAACTAGCAAAA
TGTGGCTCTGCCGTGAGGTATGGTGTTAGTAGATTTTCCATTCCTGCAACAATGCGATTT
CTATGATTTGTCAAGGTATGGATGGAAGGCATCTCCCAAGCATTTTATGTTTACGCAATT
GGATTCCCAGGATTAACAGCTTTTGGAAGTTACAACAAAAAGGGACAGGATTTTTTTAAA
CAATCGGTGTTTATTATACCATGTGGAATGGTGACGTCAATAATCATGGGCTTTGTGACG
TTTAGCATCCTTGGAAACCTGGCTTATACAAACAATGTCGAAATAACTTCAGTTATCAAA
TCAGGTCCTGGCCTAGTGTTTCAAGTCATTCCAACGGCTTTAGCGCAACTCCCAATCCCA
CAACTATGGTCAGCTCTTTTCTTTCTCACTCTTTACTTTGTGGCCATTGATTCAGCGTTT
GGTGAATTTGAAGGAGTAATAACGGTTATAGTGGACACTTTTCCAAAACTGGGGTCAACA
TTTAAACGTAGAGCTCTCACAAACTGTGGAGTGGGTCTGTTTTTCTTTTCTATGTGCCAA
ATCATGCTTACTGGGCCTGGAATCTACTGGTTCGAGTTGATGAATTATTACGGAGGTTCT
GGTATTTGCCTTATATGGATAGTCACGTGTGAATCTCTGGCTGTCGGTTGGTTGTGGGAC
GCCCGAAAATACCGCCATGACGTAACAATGATGGTTGGAAGAAAATTACCGAGAGTATTC
GATTACTGTTACAAGTTTATTGTTCCTGTCATAACAGTGACAGTGCTGATAATGTACATC
ATAGCATGGGAACCACTAACTATTGGAGATTACGTTTACCCGATGTGGGCAAACGTCATA
GGTTGGATGATGTCATTATCCTCTATATTGTGTGTTCCTATCGTGGCAGTGGTGACTTTG
TACAAAGAAAAAGG

InterProScan

ProSiteProfiles
Na/ntran_symport (IPR000175) - T[1-277] 40.659
Pfam
Na/ntran_symport (IPR000175) - T[3-275] 1.9E-70
SUPERFAMILY
SNS_sf (IPR037272) - T[4-274] 1.14E-64
PANTHER
Na/ntran_symport (IPR000175) - T[4-274] 4.0E-85
PRINTS
Na/ntran_symport (IPR000175) - T[36-56] 6.9E-17 - T[90-109] 6.9E-17 - T[174-194] 6.9E-17 - T[214-234] 6.9E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A13_HUMAN 34.831 % 181 5.28E-53
S6A11_HUMAN 34.307 % 181 8.01E-53
SC6A1_HUMAN 35.714 % 178 8.17E-52