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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S12.g00505.04.t

Possible name(s)

NGLY1; UBXN6

Gene model

Phmamm.CG.MTP2014.S12.g00505

Location

S12 [120,807 / 125,021]

Sequences

Amino acid sequence

Length: 372

>Phmamm.CG.MTP2014.S12.g00505.04.p
IRIASNILKSPTEVKFRSIRIDSKAFTEKILPFDGAVQCLMEMGFQEDNDRFTLAMTNNL
ADLREILRQLQEAFETQNKKVSPEVMTSQKNIYQRIVSHFQHSFIYENKSLQRKAKALVP
FDKLTARAHTKMTHKQKPDTANFQHFLLLEVLSWFKRDFFKWMDKPICPNCNNDSNVENT
GMASPSDEDMIWQASRVEAYVCRKCGKSLRFPRYNHPEKLLETRKGRCGEWANCFTLICR
SLDFEARHVMDWTDHVWTEVFINKWDRWVHCDPCENACDTPLVYEKGWKKKLSLVVAANA
NQVIDVTMRYTVDPKSVTQRQMTMFDRKWLDEQIDLLNASAVSSMPPQRLKELRRRLEVE
KQELSSEKRVSG

Nucleotide sequence

Length: 1,117

>Phmamm.CG.MTP2014.S12.g00505.04.t
ATTCGAATTGCAAGCAACATTTTAAAATCACCTACTGAAGTAAAATTTCGATCAATTCGG
ATTGACAGTAAAGCTTTCACAGAGAAAATTTTACCATTTGATGGAGCTGTACAGTGTTTA
ATGGAAATGGGGTTTCAGGAAGATAATGACCGTTTTACTCTGGCAATGACAAACAATCTT
GCAGATCTCAGAGAAATTCTGAGACAATTACAAGAAGCTTTTGAAACCCAAAACAAAAAA
GTCAGTCCAGAAGTCATGACTTCTCAAAAAAACATATACCAAAGGATTGTTTCACATTTC
CAGCACTCATTTATTTATGAAAATAAATCTTTGCAAAGAAAAGCAAAAGCATTGGTACCT
TTCGATAAACTTACCGCCCGAGCACATACTAAGATGACCCATAAACAGAAACCAGACACT
GCAAATTTTCAACACTTTCTCCTACTTGAGGTTTTATCTTGGTTTAAGCGAGACTTTTTC
AAATGGATGGACAAGCCAATATGTCCAAACTGCAACAATGACAGTAATGTGGAAAATACA
GGCATGGCATCTCCAAGTGATGAAGATATGATATGGCAAGCCTCAAGAGTCGAAGCATAT
GTTTGTAGAAAGTGCGGAAAAAGTCTTAGATTTCCGAGATACAACCATCCTGAAAAGCTA
CTAGAGACTAGAAAAGGGCGGTGTGGAGAATGGGCAAACTGCTTTACACTTATATGTAGA
TCTCTAGACTTTGAAGCTAGACATGTAATGGATTGGACTGATCATGTTTGGACTGAGGTA
TTTATCAACAAGTGGGACCGCTGGGTTCACTGTGATCCTTGCGAAAACGCCTGTGACACA
CCGCTAGTATACGAGAAGGGATGGAAGAAAAAGCTGTCGCTAGTGGTCGCTGCTAACGCG
AACCAGGTTATTGACGTCACCATGCGCTACACTGTCGATCCAAAGTCGGTGACGCAACGC
CAAATGACAATGTTCGACCGGAAGTGGTTGGACGAACAGATTGATTTGCTGAACGCGTCA
GCCGTTTCATCGATGCCTCCACAACGTTTGAAAGAACTTCGAAGGCGATTAGAAGTGGAA
AAGCAAGAGCTGTCATCCGAAAAGAGGGTGAGCGGAG

InterProScan

SMART
PUB_domain (IPR018997) - T[1-56] 2.9E-4
SUPERFAMILY
PUB-like_dom_sf (IPR036339) - T[2-75] 6.15E-19
Pfam
PUB_domain (IPR018997) - T[2-65] 4.7E-16
Pfam
Transglutaminase-like (IPR002931) - T[192-273] 6.7E-14
SMART
Transglutaminase-like (IPR002931) - T[220-275] 1.7E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NGLY1_HUMAN 38.592 % 276 2.68E-87