Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S12.g00505.01.t

Possible name(s)

NGLY1; UBXN6

Gene model

Phmamm.CG.MTP2014.S12.g00505

Location

S12 [120,469 / 125,031]

Sequences

Amino acid sequence

Length: 399

>Phmamm.CG.MTP2014.S12.g00505.01.p
MSSDAVKILKTNSDVDFNMGSKTLIRIASNILKSPTEVKFRSIRIDSKAFTEKILPFDGA
VQCLMEMGFQEDNDRFTLAMTNNLADLREILRQLQEAFETQNKKVSPEVMTSQKNIYQRI
VSHFQHSFIYENKSLQRKAKALVPFDKLTARAHTKMTHKQKPDTANFQHFLLLEVLSWFK
RDFFKWMDKPICPNCNNDSNVENTGMASPSDEDMIWQASRVEAYVCRKCGKSLRFPRYNH
PEKLLETRKGRCGEWANCFTLICRSLDFEARHVMDWTDHVWTEVFINKWDRWVHCDPCEN
ACDTPLVYEKGWKKKLSLVVAANANQVIDVTMRYTVDPKSVTQRQMTMFDRKWLDEQIDL
LNASAVSSMPPQRLKELRRRLEVEKQELSSEKRVSGEYG

Nucleotide sequence

Length: 1,465

>Phmamm.CG.MTP2014.S12.g00505.01.t
CCAGATGAATTGTTTTTAATTTTAGCATAAAGCAAAAGTAAAAAATTGCTAATACGTACT
TAAAAACAGCCGAACAAAAGTTTTTTATAGAGTATTTTGCGGTCACCAACACAAAGTGTA
TTAGTTTTGTTTTAAACCCAAATGGAAATACAGTACGGCGTAAAATGCACATCGATCGTT
ACAGTTCCGTTACCGGTACTTTTTGTCCTGAAGACAGGTCAAGAGGTCATAAACTCATGA
TAGGTTTCGGTTTCGGAAAGTAAAGCATGTCGAGCGATGCTGTCAAAATTTTAAAAACCA
ACAGTGATGTTGACTTCAACATGGGATCTAAAACACTTATTCGAATTGCAAGCAACATTT
TAAAATCACCTACTGAAGTAAAATTTCGATCAATTCGGATTGACAGTAAAGCTTTCACAG
AGAAAATTTTACCATTTGATGGAGCTGTACAGTGTTTAATGGAAATGGGGTTTCAGGAAG
ATAATGACCGTTTTACTCTGGCAATGACAAACAATCTTGCAGATCTCAGAGAAATTCTGA
GACAATTACAAGAAGCTTTTGAAACCCAAAACAAAAAAGTCAGTCCAGAAGTCATGACTT
CTCAAAAAAACATATACCAAAGGATTGTTTCACATTTCCAGCACTCATTTATTTATGAAA
ATAAATCTTTGCAAAGAAAAGCAAAAGCATTGGTACCTTTCGATAAACTTACCGCCCGAG
CACATACTAAGATGACCCATAAACAGAAACCAGACACTGCAAATTTTCAACACTTTCTCC
TACTTGAGGTTTTATCTTGGTTTAAGCGAGACTTTTTCAAATGGATGGACAAGCCAATAT
GTCCAAACTGCAACAATGACAGTAATGTGGAAAATACAGGCATGGCATCTCCAAGTGATG
AAGATATGATATGGCAAGCCTCAAGAGTCGAAGCATATGTTTGTAGAAAGTGCGGAAAAA
GTCTTAGATTTCCGAGATACAACCATCCTGAAAAGCTACTAGAGACTAGAAAAGGGCGGT
GTGGAGAATGGGCAAACTGCTTTACACTTATATGTAGATCTCTAGACTTTGAAGCTAGAC
ATGTAATGGATTGGACTGATCATGTTTGGACTGAGGTATTTATCAACAAGTGGGACCGCT
GGGTTCACTGTGATCCTTGCGAAAACGCCTGTGACACACCGCTAGTATACGAGAAGGGAT
GGAAGAAAAAGCTGTCGCTAGTGGTCGCTGCTAACGCGAACCAGGTTATTGACGTCACCA
TGCGCTACACTGTCGATCCAAAGTCGGTGACGCAACGCCAAATGACAATGTTCGACCGGA
AGTGGTTGGACGAACAGATTGATTTGCTGAACGCGTCAGCCGTTTCATCGATGCCTCCAC
AACGTTTGAAAGAACTTCGAAGGCGATTAGAAGTGGAAAAGCAAGAGCTGTCATCCGAAA
AGAGGGTGAGCGGAGAGTACGGGGG

InterProScan

SUPERFAMILY	PUB-like_dom_sf (IPR036339) - T[6-99] 1.16E-21
SMART	PUB_domain (IPR018997) - T[19-80] 1.2E-7
Pfam	PUB_domain (IPR018997) - T[19-89] 3.0E-18
Pfam	Transglutaminase-like (IPR002931) - T[216-297] 7.5E-14
SMART	Transglutaminase-like (IPR002931) - T[244-299] 1.7E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NGLY1_HUMAN	38.269 %	283	1.32E-89