- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S129.g03838.01.t
Possible name(s)
ACADL; ACADSB; IVD
Gene model
Location
S129 [146,673 / 150,194]
Amino acid sequence
Length: 404
>Phmamm.CG.MTP2014.S129.g03838.01.p
MAATLRAIRSVIKPNSPLNKLFSSSSASFQGIRLEGFQTGRFTDVGTRHIFNEDHDMFRE
SARKFFQEEVAPYHSEWEEAGHVSKEVWQKAGEMGLLGVNISDTHGGIGGDWLSAAIVHE
EQGYVNCSGPGFALHSDIVMPYITNYGTPEQIAKYIPDMTAGKRIGAIAMTEPSAGSDLQ
GVRTFAKRDGDDWILNGSKVFITNGFMCDVVIVVAITDKDAKSAAHGISLFLVDADTPGF
TKGKPLKKMGLKAQDTSELFFEDCRLPSSALLGGEAGLNKGFYQLMQELPQERLLIANLC
MAACEFMFEETRDYTAVARAFLDQCNALHNIGKLDTSTASMAKYYITDLNNTVAYRCVQL
HGGWGFMWEYPISRAYVDARVQTIYGGSNEIMKELIARQILKDP
Nucleotide sequence
Length: 1,215
>Phmamm.CG.MTP2014.S129.g03838.01.t
ATGGCAGCAACCTTAAGAGCAATCCGGTCAGTTATAAAGCCAAATTCACCTCTCAACAAA
CTCTTTAGTTCAAGCTCAGCCTCATTTCAAGGCATAAGGTTGGAAGGTTTCCAAACCGGA
CGCTTTACTGATGTTGGCACAAGACACATCTTTAACGAAGACCATGACATGTTTCGGGAG
TCAGCTCGGAAGTTTTTTCAAGAAGAAGTTGCCCCTTACCATTCCGAATGGGAAGAGGCT
GGTCATGTGAGCAAAGAAGTATGGCAAAAAGCTGGTGAAATGGGCTTATTAGGGGTTAAC
ATCTCCGATACTCACGGTGGTATTGGGGGTGACTGGTTATCTGCTGCTATTGTTCATGAG
GAGCAAGGATATGTAAATTGCTCCGGCCCTGGGTTTGCCTTGCATTCTGACATTGTGATG
CCATATATTACAAATTATGGTACGCCAGAGCAGATTGCCAAATATATTCCAGATATGACA
GCGGGCAAGCGAATTGGTGCAATTGCCATGACGGAGCCGTCTGCAGGAAGTGATTTGCAG
GGTGTTCGCACTTTTGCCAAAAGAGATGGTGATGACTGGATACTGAATGGAAGCAAAGTC
TTCATTACAAATGGTTTCATGTGCGACGTCGTTATTGTGGTTGCGATCACAGACAAAGAT
GCGAAATCTGCTGCACATGGCATCAGCTTATTTCTGGTGGATGCAGACACCCCAGGATTC
ACAAAAGGGAAGCCTTTGAAAAAGATGGGATTAAAGGCTCAGGATACTTCAGAACTTTTC
TTCGAAGACTGCAGATTACCATCCAGTGCATTGCTTGGTGGTGAAGCTGGTTTGAACAAG
GGTTTCTATCAGCTTATGCAAGAATTGCCACAAGAACGACTTCTAATTGCCAACTTGTGC
ATGGCTGCATGTGAATTCATGTTCGAAGAAACTAGAGATTATACTGCAGTGGCTAGAGCC
TTCTTAGATCAATGCAACGCTCTGCACAACATTGGAAAACTGGATACATCAACTGCTTCG
ATGGCTAAATACTACATCACCGACTTGAACAACACTGTGGCATACAGATGTGTTCAGTTG
CATGGAGGATGGGGATTCATGTGGGAATATCCTATTTCCAGAGCGTATGTTGATGCTCGT
GTTCAGACCATTTATGGTGGAAGCAATGAGATTATGAAAGAATTAATTGCCAGGCAAATC
CTTAAGGATCCTTGA
| Gene3D |
AcylCoA_DH/ox_N_sf (IPR037069) - T[30-164] 8.1E-36 |
| SUPERFAMILY |
AcylCoA_DH/oxidase_NM_dom (IPR009100) - T[48-291] 5.63E-84 |
| Pfam |
AcylCoA_DH/ox_N (IPR013786) - T[52-162] 1.7E-32 |
| Pfam |
Acyl-CoA_Oxase/DH_cen-dom (IPR006091) - T[167-264] 5.7E-28 |
| ProSitePatterns |
Acyl-CoA_DH_CS (IPR006089) - T[169-181] . - T[359-378] . |
| SUPERFAMILY |
AcylCo_DH-like_C (IPR036250) - T[279-403] 3.54E-31 |
| Pfam |
AcylCo_DH/oxidase_C (IPR009075) - T[317-401] 9.4E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACDSB_HUMAN | 31.481 % | 187 | 4.52E-55 |
| IVD_HUMAN | 32.115 % | 200 | 3.66E-60 |
| ACADL_HUMAN | 64.07 % | 525 | 0 |