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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S127.g03773.01.t

Possible name(s)

COX11

Gene model

Phmamm.CG.MTP2014.S127.g03773

Location

S127 [35,438 / 35,954]

Sequences

Amino acid sequence

Length: 171

>Phmamm.CG.MTP2014.S127.g03773.01.p
MFCQATGLGGDPKLGHKMDKVESMEPIRERRLNIYFNADHHAAMQWNFRPSQKVITVVPG
ETALAFYTAKNPTDEPIVGIATYNVLPTQAGLYFNKIQCFCFEEQWLNPHEEVDMPVFFY
IDPDFDDDPSLADVDDVVLSYTFFKAEEGMKLPLPGFMNVKSVQTVNAAPA

Nucleotide sequence

Length: 516

>Phmamm.CG.MTP2014.S127.g03773.01.t
ATGTTTTGCCAAGCGACCGGTCTTGGTGGAGACCCAAAGTTAGGCCATAAAATGGACAAA
GTTGAAAGTATGGAACCGATTCGGGAACGCAGATTGAACATATATTTTAATGCAGACCAC
CATGCGGCTATGCAGTGGAATTTTAGACCAAGTCAGAAAGTAATTACAGTTGTACCTGGT
GAAACTGCTCTAGCATTCTACACTGCGAAAAATCCCACTGATGAACCAATTGTTGGCATA
GCAACATACAATGTGTTACCTACACAAGCTGGACTTTATTTTAATAAGATTCAGTGTTTT
TGTTTTGAGGAACAGTGGCTGAACCCCCATGAAGAAGTCGACATGCCTGTTTTTTTCTAC
ATTGATCCTGATTTTGATGACGACCCTTCTCTGGCTGATGTTGATGACGTTGTGTTGAGT
TACACTTTTTTCAAGGCTGAAGAAGGAATGAAGCTACCATTGCCTGGTTTTATGAACGTC
AAATCTGTGCAGACTGTTAATGCTGCCCCCGCTTAA

InterProScan

PIRSF
Cyt_c_oxidase_assmbl_CtaG (IPR007533) - T[1-162] 1.6E-61
Pfam
Cyt_c_oxidase_assmbl_CtaG (IPR007533) - T[1-145] 5.9E-58
Gene3D
CtaG/Cox11_dom_sf (IPR023471) - T[21-154] 2.5E-59
SUPERFAMILY
CtaG/Cox11_dom_sf (IPR023471) - T[22-148] 1.23E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COX11_HUMAN 66.242 % 235 8.01E-79