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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S326...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S64...' > 
  4. Clone 'cien123249' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1258.g14274.01.t

Possible name(s)

LONP1; LONP2; RFC4

Gene model

Phmamm.CG.MTP2014.S1258.g14274

Location

S1258 [20,523 / 43,749]

Sequences

Amino acid sequence

Length: 460

>Phmamm.CG.MTP2014.S1258.g14274.01.p
MLQIPSRIPILFTDDIIVMPGSSSVIKVDRSRDLNLVKYVIAHTTSLRSCIIGTIPRTLP
MEKPKHPIGTAVIIMQISGMDEPPSKYMLLVHGLCRISVERITQNTPYVVAQVTQIGKWP
FEPDDNIPNDGDLPLLSSKLRQSAIQLVNALDVNKEVLIHLKTLLKKLPDHALPDLLASM
LHMRKDKKMEMLNCLDALERIQRIYPLIMERIENVKLVKIKKDLAGSFPNGNKIGKKDLQ
ILNEEGLIKDDKLIMTPKRDHDSLADGLECLEKKLKSVGLPPNVSKVAMRELQRLKKMPS
ALPEHSVLLNYLELLTDLPWCISTTDTLDLQKAKEDLDKDHHSMEILKKRVLEYLAVQKL
KHRGANIGGLILCFVGPPGVGKTSIGRSIAKTLGRKFHRISLGGVCDQSDIRGHRRTYIG
SMPGRIISGLKSVGANNPVFLLDEVDKLGKANVVLLFFTN

Nucleotide sequence

Length: 1,432

>Phmamm.CG.MTP2014.S1258.g14274.01.t
ATTTGGTTGTAGAGTGTTTGCACTGAAATAAATCATGTTGCAAATTCCATCGAGGATACC
TATTTTGTTCACTGATGACATAATTGTGATGCCAGGTTCTTCAAGTGTAATTAAAGTTGA
TAGGTCAAGAGACTTAAATTTGGTGAAATATGTGATTGCTCATACTACATCTTTAAGAAG
TTGTATCATTGGAACAATTCCCAGAACTTTGCCAATGGAAAAGCCAAAGCACCCAATTGG
AACTGCTGTGATAATCATGCAAATATCAGGGATGGATGAACCTCCATCAAAGTATATGTT
ACTTGTTCATGGGTTGTGCCGCATTTCAGTGGAAAGAATAACTCAAAACACCCCGTATGT
TGTAGCACAGGTTACACAAATTGGAAAGTGGCCCTTTGAGCCAGATGATAACATCCCTAA
TGATGGTGATTTGCCATTACTTTCTTCAAAACTTCGCCAATCAGCCATTCAACTTGTAAA
TGCCTTGGATGTGAACAAGGAAGTGTTGATTCATCTCAAGACACTTCTTAAAAAGTTGCC
AGATCATGCTTTGCCTGATTTGCTTGCCTCTATGTTGCACATGAGAAAGGATAAAAAAAT
GGAGATGCTAAATTGTTTGGATGCCCTGGAACGAATTCAGCGAATTTATCCATTAATTAT
GGAACGAATAGAGAATGTCAAGCTTGTCAAGATTAAAAAAGATCTGGCAGGTAGTTTTCC
CAATGGAAACAAAATTGGTAAGAAAGACTTGCAAATTTTAAATGAGGAGGGACTAATCAA
AGATGACAAATTGATTATGACACCTAAAAGAGATCATGATAGCTTAGCTGATGGTTTGGA
GTGTTTGGAGAAAAAATTAAAGTCTGTTGGATTACCACCTAATGTTTCAAAGGTGGCAAT
GCGGGAATTACAAAGACTGAAGAAGATGCCAAGTGCTTTGCCAGAACATTCTGTACTACT
GAACTATTTAGAGCTTTTAACAGATTTGCCATGGTGCATTTCAACAACTGATACATTGGA
CCTTCAAAAAGCTAAGGAAGATTTAGATAAAGATCATCATTCAATGGAAATATTAAAGAA
GAGAGTTTTGGAGTATTTGGCAGTGCAGAAGTTAAAGCATCGCGGAGCCAACATAGGAGG
TCTTATTTTATGTTTTGTTGGTCCACCTGGAGTTGGAAAAACTAGTATAGGTCGATCAAT
TGCCAAAACATTGGGGAGAAAATTTCACCGTATTTCTTTAGGTGGAGTTTGTGATCAGTC
TGACATCCGAGGACATCGCAGAACATATATTGGAAGTATGCCAGGTCGCATAATATCAGG
TTTAAAAAGTGTCGGTGCAAACAACCCAGTGTTTTTATTGGATGAAGTTGATAAACTGGG
TAAGGCCAATGTTGTGCTGTTGTTTTTCACTAATTAGGTGCCTTGTCCTTGC

InterProScan

SUPERFAMILY
PUA-like_sf (IPR015947) - T[7-208] 1.44E-15
SMART
Lon_substr-bd (IPR003111) - T[7-210] 7.4E-5
ProSiteProfiles
Lon_substr-bd (IPR003111) - T[8-210] 22.043
Pfam
Lon_substr-bd (IPR003111) - T[8-208] 1.9E-14
PANTHER
Lon_Prtase (IPR027065) - T[58-451] 5.0E-96
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[322-450] 9.77E-25
Pfam
ATPase_AAA_core (IPR003959) - T[372-452] 7.7E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LONM_HUMAN 43.779 % 180 2.34E-49
LONP2_HUMAN 44.864 % 380 4.11E-124