- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S124.g03710.02.t
Possible name(s)
PHF21A
Gene model
Location
S124 [107,809 / 112,142]
Amino acid sequence
Length: 445
>Phmamm.CG.MTP2014.S124.g03710.02.p
PGPPMATTASYVLLATNVTNSKKNPTVLRLVQKGQNVGGAVAITASQGKLMTHQKPVTTS
NKAHVWLNVSNSSNIKRPPTAVTQSRPKQQAPSTFQKCRILDGKVVSTGNPLPTNYIQSN
KPKQPPVVRPTTSPVSMTTTSNDICDTQPIDPMNKKLYFLDVLDLVPKEKADRLRNRRYG
KRRSVAHPVYSGGIYVSTTGTDSSKRILPPDLLGFEEMPVKRPRGRPRGSGKNANRSIPP
STGAVTSVNKEVSKIIEQTRPDRPSTSRGFVSRSLEQKGTDQKGDSHEDHCAVCNETGKL
LMCDTCSFVYHMDCLDPPLKVVPTGMWYCDTCRKKFSDNSAAPRWPGLMSVVHSYLAFDR
QRREAIESARKKAENLKQQRSSRQHQIKTMAADLITKVTAKNRSLERNRHIIDDLTKLRK
GFDSIRNGVVKFESTKPLQLDQESC
Nucleotide sequence
Length: 1,498
>Phmamm.CG.MTP2014.S124.g03710.02.t
CCCAGGCCCTCCAATGGCAACAACGGCATCTTATGTCCTTCTTGCTACAAATGTAACAAA
CTCAAAGAAAAATCCTACTGTTTTAAGACTTGTACAAAAAGGTCAAAATGTGGGCGGCGC
TGTTGCAATCACAGCTTCCCAAGGCAAATTGATGACTCATCAGAAACCTGTGACAACTTC
CAACAAAGCACATGTTTGGCTGAATGTTTCGAACAGTTCAAACATCAAGAGACCACCGAC
TGCAGTTACTCAATCGAGGCCAAAACAGCAAGCACCTAGCACTTTCCAGAAATGTCGAAT
TCTGGATGGGAAAGTTGTGTCAACGGGGAATCCCCTCCCAACAAATTACATTCAAAGCAA
CAAGCCAAAACAACCTCCAGTAGTGAGACCGACAACATCCCCTGTTTCAATGACTACTAC
TTCAAACGATATTTGTGATACACAACCTATTGATCCAATGAATAAGAAACTCTATTTCCT
TGACGTATTGGATTTAGTTCCAAAGGAGAAAGCAGATCGTTTACGTAATAGACGATACGG
CAAAAGGCGTTCCGTCGCTCACCCTGTATATAGTGGAGGCATTTACGTATCCACTACGGG
TACAGACTCCTCCAAGCGTATCCTACCACCCGACCTCCTCGGATTCGAAGAAATGCCTGT
GAAACGCCCACGAGGTCGACCACGTGGTTCGGGAAAAAATGCAAACAGGTCTATTCCGCC
GTCGACTGGGGCAGTGACTTCGGTCAACAAGGAAGTGTCGAAAATTATCGAACAAACCCG
ACCTGACCGGCCCAGCACGTCACGTGGTTTCGTTTCACGGTCACTGGAGCAGAAAGGCAC
CGATCAAAAAGGGGATTCCCACGAGGACCATTGTGCCGTGTGCAACGAAACTGGCAAGCT
GCTAATGTGTGACACCTGCTCGTTTGTCTATCACATGGACTGCCTCGACCCGCCGCTTAA
AGTGGTTCCAACCGGAATGTGGTATTGCGACACCTGCCGGAAGAAGTTTAGCGACAACTC
TGCTGCCCCCAGGTGGCCAGGTTTGATGTCCGTTGTTCATTCGTACCTTGCTTTTGACCG
TCAGCGCAGGGAAGCGATAGAAAGCGCCCGAAAAAAAGCGGAAAACTTGAAACAGCAAAG
ATCGAGCAGGCAACACCAGATCAAAACGATGGCGGCAGACTTAATAACAAAAGTCACAGC
CAAAAATCGATCCCTGGAGAGAAACCGGCATATTATCGACGACCTTACAAAGCTCCGAAA
GGGATTCGATTCGATTCGAAACGGCGTTGTTAAATTCGAATCCACCAAACCGTTGCAACT
AGACCAGGAATCGTGTTGATACAATTTAGTTTTTTTTCCTTTTAATTACTTCATATTTAT
GTTTCCAGTGACTGTTTTTACCTCACAAGGCAAAAACCAAGATTTGGATTACCAAAAATT
GCGGATTTTTTACCCACAAGTAATGAATTGAGATGACCGTTTTTCCTTCTTTTACAAC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[271-343] 4.7E-19 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[280-336] 4.65E-17 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[288-335] 10.22 |
| SMART |
Znf_PHD (IPR001965) - T[290-333] 9.4E-13 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[291-334] 9.6E-11 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[291-332] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PF21A_HUMAN | 31.273 % | 157 | 7.32E-42 |
| PF21B_HUMAN | 29.032 % | 88.2 | 1.06E-18 |