- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S124.g03710.01.t
Possible name(s)
PHF21A
Gene model
Location
S124 [107,714 / 112,116]
Amino acid sequence
Length: 436
>Phmamm.CG.MTP2014.S124.g03710.01.p
SYVLLATNVTNSKKNPTVLRLVQKGQNVGGAVAITASQGKLMTHQKPVTTSNKAHVWLNV
SNSSNIKRPPTAVTQSRPKQQAPSTFQKCRILDGKVVSTGNPLPTNYIQSNKPKQPPVVR
PTTSPVSMTTTSNDICDTQPIDPMNKKLYFLDVLDLVPKEKADRLRNRRYGKRRSVAHPV
YSGGIYVSTTGTDSSKRILPPDLLGFEEMPVKRPRGRPRGSGKNANRSIPPSTGAVTSVN
KEVSKIIEQTRPDRPSTSRGFVSRSLEQKGTDQKGDSHEDHCAVCNETGKLLMCDTCSFV
YHMDCLDPPLKVVPTGMWYCDTCRKKFSDNSAAPRWPGLMSVVHSYLAFDRQRREAIESA
RKKAENLKQQRSSRQHQIKTMAADLITKVTAKNRSLERNRHIIDDLTKLRKGFDSIRNGV
VKFESTKPLQLDQESC
Nucleotide sequence
Length: 1,567
>Phmamm.CG.MTP2014.S124.g03710.01.t
CATCTTATGTCCTTCTTGCTACAAATGTAACAAACTCAAAGAAAAATCCTACTGTTTTAA
GACTTGTACAAAAAGGTCAAAATGTGGGCGGCGCTGTTGCAATCACAGCTTCCCAAGGCA
AATTGATGACTCATCAGAAACCTGTGACAACTTCCAACAAAGCACATGTTTGGCTGAATG
TTTCGAACAGTTCAAACATCAAGAGACCACCGACTGCAGTTACTCAATCGAGGCCAAAAC
AGCAAGCACCTAGCACTTTCCAGAAATGTCGAATTCTGGATGGGAAAGTTGTGTCAACGG
GGAATCCCCTCCCAACAAATTACATTCAAAGCAACAAGCCAAAACAACCTCCAGTAGTGA
GACCGACAACATCCCCTGTTTCAATGACTACTACTTCAAACGATATTTGTGATACACAAC
CTATTGATCCAATGAATAAGAAACTCTATTTCCTTGACGTATTGGATTTAGTTCCAAAGG
AGAAAGCAGATCGTTTACGTAATAGACGATACGGCAAAAGGCGTTCCGTCGCTCACCCTG
TATATAGTGGAGGCATTTACGTATCCACTACGGGTACAGACTCCTCCAAGCGTATCCTAC
CACCCGACCTCCTCGGATTCGAAGAAATGCCTGTGAAACGCCCACGAGGTCGACCACGTG
GTTCGGGAAAAAATGCAAACAGGTCTATTCCGCCGTCGACTGGGGCAGTGACTTCGGTCA
ACAAGGAAGTGTCGAAAATTATCGAACAAACCCGACCTGACCGGCCCAGCACGTCACGTG
GTTTCGTTTCACGGTCACTGGAGCAGAAAGGCACCGATCAAAAAGGGGATTCCCACGAGG
ACCATTGTGCCGTGTGCAACGAAACTGGCAAGCTGCTAATGTGTGACACCTGCTCGTTTG
TCTATCACATGGACTGCCTCGACCCGCCGCTTAAAGTGGTTCCAACCGGAATGTGGTATT
GCGACACCTGCCGGAAGAAGTTTAGCGACAACTCTGCTGCCCCCAGGTGGCCAGGTTTGA
TGTCCGTTGTTCATTCGTACCTTGCTTTTGACCGTCAGCGCAGGGAAGCGATAGAAAGCG
CCCGAAAAAAAGCGGAAAACTTGAAACAGCAAAGATCGAGCAGGCAACACCAGATCAAAA
CGATGGCGGCAGACTTAATAACAAAAGTCACAGCCAAAAATCGATCCCTGGAGAGAAACC
GGCATATTATCGACGACCTTACAAAGCTCCGAAAGGGATTCGATTCGATTCGAAACGGCG
TTGTTAAATTCGAATCCACCAAACCGTTGCAACTAGACCAGGAATCGTGTTGATACAATT
TAGTTTTTTTTCCTTTTAATTACTTCATATTTATGTTTCCAGTGACTGTTTTTACCTCAC
AAGGCAAAAACCAAGATTTGGATTACCAAAAATTGCGGATTTTTTACCCACAAGTAATGA
ATTGAGATGACCGTTTTTCCTTCTTTTACAACCATTATGCATTTTGTGACGTAATTTCGT
TACAACTTGGAAAAAGAAATACTTAACTGCTCAAATTGCGAAGCTTTATCAAAATTTGAA
ACAAGAC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[262-334] 4.5E-19 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[271-327] 4.65E-17 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[279-326] 10.22 |
| SMART |
Znf_PHD (IPR001965) - T[281-324] 9.4E-13 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[282-323] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[282-325] 9.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PF21A_HUMAN | 31.273 % | 157 | 5.88E-42 |
| PF21B_HUMAN | 29.032 % | 87.8 | 1.3E-18 |