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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S53...' > 
  2. Transcript 'Cisavi.CG.ENS81.R48....' > 
  3. Transcript 'KH2012:KH.C7.141.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S123.g03685.01.t

Possible name(s)

RNF13; RNF167; ZNRF4

Gene model

Phmamm.CG.MTP2014.S123.g03685

Location

S123 [82,969 / 88,534]

Sequences

Amino acid sequence

Length: 353

>Phmamm.CG.MTP2014.S123.g03685.01.p
MSVPLKLSFLFLPQVFLAPIVYSDVIGYDKSNISESFQDYEAEFGTTIESTIVGILAAAN
PFDACHAIKPWPFPNKPTNQTVSTFVLIMRGGCDFGIKVLNAQNANFDAAIVFDPESETL
VRMSSSEGDEYDVCAICLDEYEEGDKLRVLPCQHAYHCKCVDPWLTSSKRVCPLCKRRVL
SDDESSNSDTDYSDDDSEHAPLLRHAVASSPNSATLATGFSSRNPILRSYSNSTVTSVGS
TSHHSIVDEETPHNSMMDLHGQAGSPIFHSFRQTDSPSPHSLTVTADITPARPVILPQHS
DEEYSCASSPVVGSEISSYKDAEEIFVVSGVTNFVFAAFQTPKESDDDQNPLI

Nucleotide sequence

Length: 1,062

>Phmamm.CG.MTP2014.S123.g03685.01.t
ATGTCCGTGCCTTTAAAGCTTTCTTTTCTATTTCTGCCTCAAGTTTTTCTTGCTCCCATT
GTCTACAGTGATGTCATTGGGTATGACAAGAGCAACATATCAGAGTCATTCCAGGACTAT
GAAGCAGAATTTGGCACAACAATAGAGAGTACAATTGTGGGCATATTGGCTGCAGCTAAT
CCATTCGATGCTTGCCATGCAATCAAACCTTGGCCTTTTCCAAACAAACCGACCAATCAA
ACTGTCAGTACTTTTGTTCTTATTATGAGAGGAGGTTGTGATTTTGGGATCAAGGTGTTG
AATGCTCAAAATGCAAATTTTGATGCTGCTATAGTTTTTGATCCAGAATCTGAAACTCTG
GTCCGTATGAGCTCTTCAGAAGGAGATGAATATGATGTTTGTGCCATCTGCCTTGATGAA
TATGAAGAGGGGGATAAGTTAAGAGTGTTGCCATGTCAACATGCGTATCACTGCAAGTGT
GTTGATCCCTGGCTAACAAGCAGCAAGCGAGTATGTCCATTGTGCAAACGACGAGTACTC
AGTGATGATGAATCTTCCAATTCAGACACAGATTACAGTGACGATGATAGTGAGCATGCT
CCTTTACTACGTCATGCCGTTGCCTCATCTCCAAACTCAGCAACATTGGCCACTGGATTT
AGTTCTCGAAATCCAATTTTGCGAAGCTATTCAAATAGCACTGTCACAAGCGTGGGATCA
ACTAGTCATCACAGCATTGTTGATGAAGAAACACCACACAATTCTATGATGGACCTTCAT
GGACAGGCTGGGTCGCCAATTTTTCATTCTTTTAGGCAAACTGATTCGCCGAGCCCTCAC
AGCCTTACTGTCACAGCAGATATAACACCAGCTCGTCCAGTAATTCTACCTCAACACTCT
GATGAAGAATATAGTTGTGCAAGTAGTCCAGTAGTGGGAAGTGAAATAAGTTCCTACAAA
GATGCTGAAGAAATTTTTGTTGTTTCCGGCGTTACAAATTTTGTATTTGCAGCATTTCAA
ACACCCAAGGAATCAGATGATGACCAAAATCCATTGATTTAA

InterProScan

Pfam
Znf_RING (IPR001841) - T[133-176] 3.4E-13
ProSiteProfiles
Znf_RING (IPR001841) - T[134-176] 12.814
SMART
Znf_RING (IPR001841) - T[134-175] 2.6E-8
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[151-183] 4.8E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNF13_HUMAN 53.913 % 116 1.72E-29
RN167_HUMAN 49.107 % 102 2.05E-24
ZNRF4_HUMAN 55.224 % 90.1 6.26E-20