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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA83YP07'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1209.g14090.01.t

Possible name(s)

YTHDF1; YTHDF2; YTHDF3

Location

S1209 [22,639 / 28,514]

Sequences

Amino acid sequence

Length: 459

>Phmamm.CG.MTP2014.S1209.g14090.01.p
MPATPHDYLGGGEALPSGNSNMIGHSAPGTAIPNASGLIQTNDSISKMPVGSSNSLKIVE
QGIQNMGLGVSSMHNDQMKQQNVSMSIPVGSAGVTQNVAMAGQVGQAVNSNSAGSPVLPR
SNAPKPVSWAAIASKPAKPQPKPKVKSAVGTGLPPPIKHNMDIGTWDNAQPPAVKGPARG
PMPGQPPTMPQRWSAPRQGGAPQGSSDGQTMSSNQIHQNIAAGTESPNGSTSKSLSDLDE
SVNRVLEKLKAENDYNPKRLTLDVRNARFFVIKSYSEDDIHRSIKYNIWCSTEHGNKRLD
AAYRAQQGRGPVIFLYSVNGSGHFCGVAEMTSNIDYSKRAGVWSQDKWKGKFQVRWIYAK
DVPNNMLRHIRLENNENKPVTNSRDTQEVPAEKGRQVLKIISNYKHTTSIFDDFAHYERR
EQEEELQRAKRNEQTKNRENHRRGNKNPSSKNEQSEQLS

Nucleotide sequence

Length: 2,685

>Phmamm.CG.MTP2014.S1209.g14090.01.t
ACTGTATTGTCTGTTACGTGATGTCAAACACAAGTTTGGAACAGCAGAAGGGAGGAAGAT
CAAGTATGCAGAACGGAATAGACCAAAAAAGTCAAAATACAAGGCAGGATGAATTTGACT
CAAGTTATATGCACCATGCTAATGTAAATCAAGCTTATGGAATGCCCCCAACCACTGACT
CATACATGCCAAGTTATTATGGCCAAATGGCATTTCCGTACATGGGAGGTTCTGAATGGT
CAACAGGGTCGGACTCCATGCCGTATCTTTCTGGATATGGAGGTGATGCGCAGCAACCCC
GTTTCGTTCCTGATGCTGTCTTTAATCATCCGCCAGCACCATTAGGCAGTACCCCGGTAT
TATGAAGTCGTGTTTGTTGGCAAATCTTCTAAAGTTGCTAAAACAAGTTTTGTTTTATAG
GCTTACTACAACCACCAACCTTACAACTTTTTTCCACCTGGAAGTGACTTTAGTGCTTGG
GCATCACCAAGTGCAACCCATGGGACTGCAGTGCCAGATAACAGTGGAGGTTCGGGTTTC
GGACAACAAAGTGCCCAAACAGCACCATACAATGGAGATTATTACCAATCAATTATGCCT
GCGACTCCTCATGACTATTTAGGTGGTGGAGAGGCTTTGCCATCTGGGAACAGCAATATG
ATTGGTCACAGTGCACCTGGTACAGCAATACCCAACGCAAGTGGTTTAATTCAAACTAAC
GACAGCATTAGCAAAATGCCTGTTGGTTCTTCAAACAGTTTGAAGATTGTTGAACAGGGA
ATTCAAAATATGGGCCTGGGTGTCTCATCGATGCATAATGACCAAATGAAACAACAAAAC
GTTTCAATGTCAATACCTGTTGGTTCTGCTGGTGTTACGCAAAATGTTGCTATGGCAGGT
CAAGTTGGACAAGCTGTCAACTCGAACAGTGCTGGCAGCCCTGTTTTACCCAGGTCAAAT
GCACCAAAGCCGGTGTCATGGGCAGCAATTGCTTCAAAACCAGCCAAACCTCAACCGAAA
CCTAAAGTGAAGTCTGCTGTTGGAACTGGATTACCACCACCTATTAAGCATAACATGGAT
ATTGGTACTTGGGACAATGCTCAACCTCCAGCTGTAAAAGGGCCTGCAAGAGGACCAATG
CCTGGACAACCACCAACTATGCCGCAAAGGTGGTCAGCTCCTCGACAGGGTGGCGCACCA
CAAGGGTCTTCAGATGGTCAAACCATGTCAAGCAACCAAATTCACCAGAACATTGCTGCT
GGTACTGAAAGCCCAAATGGTTCAACTTCAAAATCCTTGTCAGACTTGGATGAAAGTGTA
AACAGGGTACTGGAAAAATTAAAAGCAGAAAATGATTACAACCCCAAGCGTTTGACATTA
GATGTTCGCAACGCCCGATTTTTTGTCATTAAGTCGTATTCAGAAGATGACATTCATCGG
TCTATAAAGTATAACATTTGGTGTTCCACTGAACATGGAAATAAAAGGTTGGATGCTGCT
TATCGAGCCCAACAAGGACGAGGCCCTGTTATATTTCTTTACTCTGTGAATGGCTCTGGT
CATTTTTGCGGTGTTGCTGAGATGACTAGCAACATTGACTACAGCAAGCGAGCTGGTGTT
TGGTCACAGGACAAATGGAAGGGCAAGTTTCAAGTGCGCTGGATTTATGCAAAAGACGTT
CCAAACAATATGCTGCGTCATATTCGCCTGGAAAACAACGAGAACAAACCTGTGACAAAC
TCACGGGACACGCAAGAGGTTCCTGCTGAAAAAGGGCGCCAGGTTCTTAAGATCATAAGC
AACTATAAACATACAACAAGCATTTTTGATGACTTCGCTCATTATGAACGTCGTGAACAA
GAAGAAGAACTTCAAAGAGCCAAGCGCAATGAACAGACAAAAAACAGAGAGAACCACAGA
AGAGGAAATAAGAATCCTTCATCAAAAAATGAACAAAGCGAACAGCTGTCTTAAAAGGGA
AACTGCTCACAAAAGAGTTTTAATGATGTCTATAATGTGTGTACTCTTAAAGTGATATTT
GGATGTAGTAATCATTGACTGTCATTTCTTCCCAATAATTTGTTGTGGCTTCTTTAATCA
ATTACAATTTATTATCTGTAGTTTGTTTTTCCATATGTACCCCATTTCACTACATAGACA
ATTTAGTTGCTACCCTGCTGAAACAAGGCCAAGACCAAGCATGTTGATTACTTGAAAGGA
TTTAGGAACAAAACATCCATCGATGACATGTGTGACATGAACTTCTATTTCAATTGTGAC
TGGTTTGAAACCATGGTGATTACCAACACACCAATGAAAACTGAAAGCCAGGCATTTTGC
TACTGAGATGTTTGGCCAAATGCACTTTCTGTTTTTGTTTTAGTCAGTATATTACAAACC
CAAGTTCCTGTGCATTGTCAGCAAAATGTTATTTATAGGAAAGTTAATGCTACTGCTTTA
GCCTTACTGTGGGGCCAAACAAACCAATAATCAAAAACAAAGGTGGACTTAATTCTGTAA
CTGCTTAGTATTTCTTGTTTTTGTGTGTGTAAATAAAATTATCACAAAACATTGAAGCCT
TTTAAAAAATGCAATTAGTCCTCTTCCTGTGTGGTGTTACAACAATATCTGAATGTACAG
TTGGCTTTATAGTAGTATAACATAATACTTAATTACAAATATGAC

InterProScan

ProSiteProfiles
YTH_domain (IPR007275) - T[267-401] 47.358
Pfam
YTH_domain (IPR007275) - T[267-401] 9.4E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
YTHD1_HUMAN 52.83 % 379 4.95E-127
YTHD2_HUMAN 48.764 % 373 1.93E-124