Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S118.g03570.01.t

Possible name(s)

PYROXD1

Gene model

Phmamm.CG.MTP2014.S118.g03570

Location

S118 [76,252 / 78,277]

Sequences

Amino acid sequence

Length: 409

>Phmamm.CG.MTP2014.S118.g03570.01.p
MEINSGEKFVVIGCGETLKYTKLCVCTGARQNVIFSDNKHVIGIRDTASAKELDRKLHNA
ERLVVVGNGGIAIELIFQIECCNVVWVIKDKAIGQVFFDPGASQFFLPILLNKKTDSSDM
KRMTYKLEQSAATKAGHVTGGALGPDWHQNLQLAGQAGQTKEINIQYQAEVESILSLDQV
DHSEVDQKSNKSLWPVYAKLTNGKVLGCDFIVSATGVVPNTEVLTQLPCSFSEDGGVRID
ENMRVTGLCDVYAAGDVCSTTAWQKKPHWHQMRLWTQARQMGMFAAQCMISHHKNIQTSN
SSDYETPQDICFDLFAHATRFFGKRVILLGRYNAQGIEDSQGLEFLLRTTPGEEYIKVVM
LNGRMQGAVLIGETDLEETFENLILNEIDLSMFGEDLLNPDVDITDYFD

Nucleotide sequence

Length: 1,230

>Phmamm.CG.MTP2014.S118.g03570.01.t
ATGGAAATCAACTCTGGTGAGAAGTTTGTTGTTATTGGCTGCGGCGAAACCCTAAAATAC
ACAAAACTTTGTGTCTGCACTGGTGCTCGTCAAAATGTCATCTTTTCTGACAACAAGCAT
GTTATCGGAATACGAGATACAGCTTCTGCTAAAGAACTGGACAGAAAACTTCACAATGCT
GAACGACTTGTAGTTGTTGGGAATGGTGGGATTGCAATTGAACTTATCTTTCAAATCGAG
TGTTGTAATGTTGTCTGGGTAATTAAGGACAAAGCTATTGGTCAGGTATTTTTTGACCCA
GGTGCTTCACAATTTTTTCTCCCTATCTTGTTAAATAAAAAAACTGATTCTTCAGACATG
AAAAGAATGACATATAAACTTGAGCAATCTGCAGCCACAAAAGCTGGACATGTAACTGGG
GGTGCTTTAGGGCCGGATTGGCATCAAAATCTACAACTTGCTGGTCAAGCTGGCCAAACT
AAAGAGATCAACATTCAGTACCAGGCTGAGGTAGAATCAATCCTTTCATTAGACCAAGTT
GACCACTCAGAAGTTGACCAAAAGTCCAACAAGTCTTTATGGCCTGTATATGCCAAACTT
ACCAATGGTAAAGTGTTGGGATGTGATTTTATAGTCAGTGCCACTGGTGTGGTTCCAAAC
ACTGAAGTACTAACACAACTGCCTTGCAGTTTCAGTGAAGATGGGGGAGTAAGAATTGAT
GAAAACATGAGAGTTACTGGCTTGTGTGATGTCTACGCAGCCGGTGATGTATGCAGCACA
ACAGCTTGGCAGAAAAAGCCACATTGGCACCAAATGCGTCTTTGGACTCAAGCAAGGCAG
ATGGGAATGTTTGCGGCCCAATGCATGATTTCCCATCACAAAAATATACAGACATCCAAC
AGTTCTGACTATGAAACTCCCCAGGATATTTGCTTTGATTTGTTTGCTCATGCAACAAGG
TTCTTTGGCAAGAGAGTCATTCTGCTTGGTCGATATAATGCACAAGGTATTGAGGACAGT
CAAGGGTTGGAGTTTTTGTTGCGGACAACACCAGGGGAGGAATACATTAAAGTAGTGATG
TTGAATGGCAGAATGCAAGGCGCTGTCTTGATCGGTGAAACTGATTTGGAAGAAACTTTT
GAAAATTTAATACTCAATGAGATTGATTTGTCAATGTTCGGAGAAGACTTGCTAAACCCA
GATGTGGATATAACTGACTATTTTGACTGA

InterProScan

Gene3D	FAD/NAD-bd_sf (IPR036188) - T[3-28] 6.3E-11 - T[29-116] 6.3E-11 - T[141-298] 1.2E-19
SUPERFAMILY	FAD/NAD-bd_sf (IPR036188) - T[3-294] 1.55E-16 - T[37-294] 2.08E-17
Pfam	FAD/NAD-binding_dom (IPR023753) - T[13-80] 1.6E-6 - T[179-282] 1.3E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PYRD1_HUMAN	49.18 %	399	2.91E-136