- Transcript 'KH2012:KH.L152.7.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S95...' >
- Transcript 'KH2012:KH.C4.439.v1....' >
- Transcript 'KH2012:KH.S1206.2.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S118.g03567.02.t
Possible name(s)
LAMC1; LAMC3; NTN1
Gene model
Location
S118 [56,025 / 57,162]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S118.g03567.02.p
MCQRRTSPKDAGSNPSTFTFVLFVFSILAHVDSTCKGRSDSQCCANKVPIQCTPSFENIA
MNKVVEVSETCGIPRHEKFCHLAESPAGFTRVCDVCKRIGRKSHPARFLTDINDTGRLTY
WQSKTVGVGSRRDITLTVSFGKQFELAYISMEFFSRLPRALIIYKKMNHAARWEPYQYYA
EDCSSYFGMQSKEFANGTNEREVLCKNFENQDEVRGGSVVFNPTLGRPSGHDVEESFIMQ
DWVTATDVRFVLDPAEISRHSLRSGRAVGTLNVANKRHEAFTMNHALNTPVTKGAVITPS
TGPTNELQFKHYAINDISIGGTCKCNGHASSCSLKKGKLACDCRHNTDGVNCEKCKAFYH
QRPWKRASRSSANECVGE
Nucleotide sequence
Length: 1,137
>Phmamm.CG.MTP2014.S118.g03567.02.t
ATGTGCCAACGTCGGACTAGTCCAAAGGACGCGGGTTCAAACCCCAGCACTTTCACATTC
GTTTTATTCGTGTTTTCAATTCTCGCTCATGTCGATTCAACTTGCAAAGGCCGAAGCGAC
TCCCAATGTTGCGCCAACAAGGTCCCGATCCAATGCACGCCCAGCTTTGAAAACATCGCG
ATGAACAAAGTCGTCGAAGTTTCGGAAACCTGCGGGATTCCGAGGCACGAGAAATTTTGT
CATCTTGCCGAAAGTCCGGCCGGATTCACTCGAGTTTGCGACGTTTGCAAGAGAATCGGC
CGAAAATCTCACCCTGCCCGGTTCCTAACTGACATCAACGACACAGGCAGGTTGACTTAT
TGGCAGTCGAAAACCGTTGGCGTGGGTTCGCGACGAGATATCACATTGACAGTCTCGTTT
GGGAAGCAATTTGAACTCGCTTACATCAGCATGGAGTTTTTCTCGCGTCTTCCCCGAGCG
CTGATCATCTACAAGAAAATGAACCACGCCGCGAGATGGGAACCGTACCAGTATTACGCC
GAGGACTGCAGCAGTTACTTCGGGATGCAAAGCAAGGAGTTCGCGAACGGAACAAACGAG
CGTGAAGTCTTGTGTAAAAATTTTGAAAATCAGGACGAGGTGCGAGGCGGGAGCGTGGTG
TTCAACCCGACCTTGGGACGACCTTCAGGCCACGATGTAGAGGAGAGTTTCATCATGCAG
GACTGGGTGACGGCAACCGACGTCCGCTTCGTACTCGATCCCGCTGAGATTTCACGGCAT
TCGCTGCGTAGTGGTCGTGCAGTCGGAACCCTTAACGTCGCAAACAAACGACATGAGGCC
TTCACCATGAACCACGCCCTAAACACGCCAGTTACGAAAGGAGCAGTGATTACGCCCTCT
ACCGGACCAACTAATGAACTCCAATTCAAGCACTACGCGATCAACGACATCAGCATAGGA
GGAACGTGCAAATGCAACGGCCACGCGTCGAGTTGTTCGCTTAAGAAGGGAAAACTTGCG
TGCGATTGCCGCCACAACACGGACGGAGTGAATTGTGAGAAGTGTAAAGCGTTCTACCAC
CAGCGTCCGTGGAAACGAGCCAGTAGGAGCAGCGCGAATGAGTGTGTTGGTGAGTAA
| SMART |
Laminin_N (IPR008211) - T[46-321] 6.7E-42 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[48-322] 38.838 |
| Pfam |
Laminin_N (IPR008211) - T[52-321] 5.7E-52 |
| Pfam |
Laminin_EGF (IPR002049) - T[323-370] 3.4E-7 |
| SMART |
Laminin_EGF (IPR002049) - T[323-375] 2.6E-7 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[341-375] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 35.522 % | 206 | 8.27E-59 |
| LAMC3_HUMAN | 33.433 % | 194 | 9.7E-55 |
| NET1_HUMAN | 35.224 % | 214 | 5.03E-64 |