- Transcript 'KH2012:KH.C12.47.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S40...' >
- Transcript 'Mooccu.CG.ELv1_2.S61...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S118.g03567.01.t
Possible name(s)
LAMC1; LAMC3; NTN1
Gene model
Location
S118 [55,933 / 57,270]
Amino acid sequence
Length: 386
>Phmamm.CG.MTP2014.S118.g03567.01.p
MFKELFCAMCQRRTSPKDAGSNPSTFTFVLFVFSILAHVDSTCKGRSDSQCCANKVPIQC
TPSFENIAMNKVVEVSETCGIPRHEKFCHLAESPAGFTRVCDVCKRIGRKSHPARFLTDI
NDTGRLTYWQSKTVGVGSRRDITLTVSFGKQFELAYISMEFFSRLPRALIIYKKMNHAAR
WEPYQYYAEDCSSYFGMQSKEFANGTNEREVLCKNFENQDEVRGGSVVFNPTLGRPSGHD
VEESFIMQDWVTATDVRFVLDPAEISRHSLRSGRAVGTLNVANKRHEAFTMNHALNTPVT
KGAVITPSTGPTNELQFKHYAINDISIGGTCKCNGHASSCSLKKGKLACDCRHNTDGVNC
EKCKAFYHQRPWKRASRSSANECVGE
Nucleotide sequence
Length: 1,337
>Phmamm.CG.MTP2014.S118.g03567.01.t
GTAAAATTTAATTTAAACTCGCGAATCGGATAAATGTTCTGAGCTGATTGAGAACTACTT
TGGCTGAAATGTTTAAGGAACTGTTTTGTGCGATGTGCCAACGTCGGACTAGTCCAAAGG
ACGCGGGTTCAAACCCCAGCACTTTCACATTCGTTTTATTCGTGTTTTCAATTCTCGCTC
ATGTCGATTCAACTTGCAAAGGCCGAAGCGACTCCCAATGTTGCGCCAACAAGGTCCCGA
TCCAATGCACGCCCAGCTTTGAAAACATCGCGATGAACAAAGTCGTCGAAGTTTCGGAAA
CCTGCGGGATTCCGAGGCACGAGAAATTTTGTCATCTTGCCGAAAGTCCGGCCGGATTCA
CTCGAGTTTGCGACGTTTGCAAGAGAATCGGCCGAAAATCTCACCCTGCCCGGTTCCTAA
CTGACATCAACGACACAGGCAGGTTGACTTATTGGCAGTCGAAAACCGTTGGCGTGGGTT
CGCGACGAGATATCACATTGACAGTCTCGTTTGGGAAGCAATTTGAACTCGCTTACATCA
GCATGGAGTTTTTCTCGCGTCTTCCCCGAGCGCTGATCATCTACAAGAAAATGAACCACG
CCGCGAGATGGGAACCGTACCAGTATTACGCCGAGGACTGCAGCAGTTACTTCGGGATGC
AAAGCAAGGAGTTCGCGAACGGAACAAACGAGCGTGAAGTCTTGTGTAAAAATTTTGAAA
ATCAGGACGAGGTGCGAGGCGGGAGCGTGGTGTTCAACCCGACCTTGGGACGACCTTCAG
GCCACGATGTAGAGGAGAGTTTCATCATGCAGGACTGGGTGACGGCAACCGACGTCCGCT
TCGTACTCGATCCCGCTGAGATTTCACGGCATTCGCTGCGTAGTGGTCGTGCAGTCGGAA
CCCTTAACGTCGCAAACAAACGACATGAGGCCTTCACCATGAACCACGCCCTAAACACGC
CAGTTACGAAAGGAGCAGTGATTACGCCCTCTACCGGACCAACTAATGAACTCCAATTCA
AGCACTACGCGATCAACGACATCAGCATAGGAGGAACGTGCAAATGCAACGGCCACGCGT
CGAGTTGTTCGCTTAAGAAGGGAAAACTTGCGTGCGATTGCCGCCACAACACGGACGGAG
TGAATTGTGAGAAGTGTAAAGCGTTCTACCACCAGCGTCCGTGGAAACGAGCCAGTAGGA
GCAGCGCGAATGAGTGTGTTGGTGAGTAAACGACCTTATAATATGATGTAAGATTTTAGA
ACCATAGACCATAAGTTGTTCGCAATACGTAGATATATTCCGACCCAAAATTTAGATAAG
ATTATTAGGATTTTGCC
| SMART |
Laminin_N (IPR008211) - T[54-329] 6.7E-42 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[56-330] 38.838 |
| Pfam |
Laminin_N (IPR008211) - T[60-329] 6.1E-52 |
| Pfam |
Laminin_EGF (IPR002049) - T[331-378] 3.5E-7 |
| SMART |
Laminin_EGF (IPR002049) - T[331-383] 2.6E-7 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[349-383] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 35.522 % | 206 | 9.52E-59 |
| LAMC3_HUMAN | 33.433 % | 194 | 1.45E-54 |
| NET1_HUMAN | 35.224 % | 214 | 6.38E-64 |