- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1138.g13832.02.t
Possible name(s)
FOXB1; FOXD4; FOXE1
Gene model
Location
S1138 [38,651 / 40,598]
Amino acid sequence
Length: 648
>Phmamm.CG.MTP2014.S1138.g13832.02.p
MIDRHYVQMQTHLASPFAARNLAPPPSAHQPQHADSCQISGTSCNESLPSPSCVSAYQQE
GSMPQPTAEQANYHTYSESPLVGGGQERVCNSHHSAESLNQESICDIGEDNRELDVGVPK
ESDCSMSEHDGLLTETGDEEDKQNREKNQCCDSTTNDAKPNEADVVTTTSSGRRRKRPIQ
RGKPPYSYIALISMAIASSPERKLTLGHIYKFIMERFPFYREQNKKWQNSIRHNLTLNDC
FIKLPREPGKPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRSESEKALLNTYMQDQSAFT
PTNAMKAYGPPHPSANTYYPQHGMMTSNYLSPIMHSVGGTMPHQMLTHYPPPMASPTTAN
PRMFSIENIXMQDQSAFTPTNAMKAYGPPHPSANTYYPQHGMMTSNYLSPIMHSVGGTMP
HQMLTHYPPPMASPTTANPRMFSIENIIGHPSRPGEVAAGEMSSSLYLESNRSDGLNPPV
PNPAMIHPERDSAVTSNPQSHEATPAIHSNLSPSTGYTSGMGGSSLRGMPSSAAGASPNA
VSPYSFHGTSPGSLAMNVPAYSACATSSTSYIGGGNQRLGSLPMKASYPGTFSSPVHHYH
GEGASAAGFAGEFGSLQSPTQINGLSNNPYMRSSAAGYGGFERYIPTI
Nucleotide sequence
Length: 1,947
>Phmamm.CG.MTP2014.S1138.g13832.02.t
ATGATCGATCGGCATTATGTGCAGATGCAGACTCACTTGGCATCACCCTTCGCAGCACGC
AACCTGGCGCCACCACCTTCAGCCCACCAACCGCAACATGCCGACTCATGTCAAATTAGC
GGCACGAGTTGCAATGAAAGTTTGCCGTCTCCGTCATGTGTTTCTGCGTACCAACAAGAA
GGTTCCATGCCACAACCTACAGCAGAGCAGGCAAATTATCACACTTATAGCGAATCGCCA
CTTGTTGGTGGGGGTCAGGAACGAGTTTGCAACAGTCACCATTCAGCAGAATCGCTCAAC
CAGGAATCGATTTGCGATATTGGCGAGGATAATCGTGAACTTGATGTTGGTGTCCCAAAA
GAAAGTGACTGCAGCATGAGCGAACATGACGGTTTGCTTACAGAAACTGGCGACGAAGAG
GACAAACAGAATAGGGAGAAAAACCAATGTTGCGATTCTACGACCAATGACGCTAAGCCG
AATGAAGCCGATGTTGTTACAACTACCAGTTCCGGTAGACGCCGAAAGCGACCCATTCAG
CGTGGCAAGCCACCTTACAGCTATATTGCCTTGATTTCTATGGCAATTGCCAGCTCACCT
GAGCGCAAGCTTACCTTAGGACATATTTACAAGTTCATTATGGAGCGCTTCCCATTCTAT
CGCGAACAAAACAAGAAATGGCAAAACTCGATTCGCCATAACCTGACCCTAAACGATTGC
TTCATTAAGTTGCCTCGCGAACCGGGGAAGCCTGGAAAGGGCAATTACTGGACATTGGAC
CCAGCTGCTGAAGACATGTTTGACAACGGTTCGTTCCTTCGTCGTCGAAAGCGATTTAAG
CGTTCTGAATCAGAGAAAGCCCTGCTGAACACTTACATGCAAGATCAAAGTGCATTTACC
CCAACTAATGCCATGAAAGCATATGGTCCCCCTCATCCATCAGCCAACACATACTACCCA
CAACATGGTATGATGACTAGCAACTATTTGTCGCCTATAATGCATTCTGTAGGTGGTACC
ATGCCCCATCAAATGCTTACGCACTACCCACCACCAATGGCGTCACCCACAACGGCCAAC
CCCCGAATGTTTAGCATCGAGAACATTATNATGCAAGATCAAAGTGCATTTACCCCAACT
AATGCCATGAAAGCATATGGTCCCCCTCATCCATCAGCCAACACATACTACCCACAACAT
GGTATGATGACTAGCAACTATTTGTCGCCTATAATGCATTCTGTAGGTGGTACCATGCCC
CATCAAATGCTTACGCACTACCCACCACCAATGGCGTCACCCACAACGGCCAACCCCCGA
ATGTTTAGCATCGAGAACATTATCGGCCACCCAAGCAGACCTGGCGAGGTGGCGGCGGGC
GAGATGTCGAGCTCGCTGTATTTGGAATCGAACAGAAGCGACGGCCTTAATCCGCCTGTG
CCTAATCCGGCAATGATTCACCCTGAACGGGATTCGGCTGTGACGAGCAATCCACAGAGT
CACGAAGCAACTCCAGCAATCCACAGCAACCTGAGTCCATCGACTGGGTACACATCAGGA
ATGGGTGGTTCATCCCTAAGGGGAATGCCAAGCAGCGCAGCCGGTGCGTCACCGAACGCG
GTCTCGCCTTACTCCTTTCACGGTACTTCGCCAGGCTCTCTCGCGATGAACGTGCCGGCA
TATTCGGCCTGTGCTACATCAAGTACTTCCTACATCGGCGGTGGGAATCAGCGGCTCGGA
TCTCTGCCAATGAAAGCGTCCTACCCCGGCACCTTCTCGAGCCCTGTTCACCATTACCAC
GGTGAGGGAGCATCTGCTGCCGGTTTTGCAGGCGAGTTTGGAAGCCTGCAATCACCAACT
CAAATTAACGGTTTATCTAACAACCCGTACATGAGATCGTCGGCTGCGGGTTACGGTGGA
TTTGAGCGCTATATTCCCACTATTTAG
| SMART |
Fork_head_dom (IPR001766) - T[181-271] 2.3E-59 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[181-282] 8.4E-45 |
| CDD |
Fork_head_dom (IPR001766) - T[183-260] 1.36988E-48 |
| Pfam |
Fork_head_dom (IPR001766) - T[183-267] 1.9E-37 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[183-196] . |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[183-277] 1.63E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[183-277] 40.344 |
| PRINTS |
Fork_head_dom (IPR001766) - T[183-196] 3.2E-22 - T[204-221] 3.2E-22 - T[227-244] 3.2E-22 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[227-233] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXE1_HUMAN | 80.851 % | 178 | 2.68E-50 |
| FOXB1_HUMAN | 66.99 % | 166 | 3.03E-46 |
| FOXD4_HUMAN | 70.192 % | 171 | 4.33E-47 |
