- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1138.g13832.01.t
Possible name(s)
FOXB1; FOXD4; FOXE1
Gene model
Location
S1138 [36,745 / 41,500]
Amino acid sequence
Length: 710
>Phmamm.CG.MTP2014.S1138.g13832.01.p
MLTYYPEMQGVHHPNPHIHAVPSHHQTSTQHSSSVVGSLSSYPHYHGHNFAGQHHFTHSG
SNMIDRHYVQMQTHLASPFAARNLAPPPSAHQPQHADSCQISGTSCNESLPSPSCVSAYQ
QEGSMPQPTAEQANYHTYSESPLVGGGQERVCNSHHSAESLNQESICDIGEDNRELDVGV
PKESDCSMSEHDGLLTETGDEEDKQNREKNQCCDSTTNDAKPNEADVVTTTSSGRRRKRP
IQRGKPPYSYIALISMAIASSPERKLTLGHIYKFIMERFPFYREQNKKWQNSIRHNLTLN
DCFIKLPREPGKPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRSESEKALLNTYMQDQSA
FTPTNAMKAYGPPHPSANTYYPQHGMMTSNYLSPIMHSVGGTMPHQMLTHYPPPMASPTT
ANPRMFSIENIXMQDQSAFTPTNAMKAYGPPHPSANTYYPQHGMMTSNYLSPIMHSVGGT
MPHQMLTHYPPPMASPTTANPRMFSIENIIGHPSRPGEVAAGEMSSSLYLESNRSDGLNP
PVPNPAMIHPERDSAVTSNPQSHEATPAIHSNLSPSTGYTSGMGGSSLRGMPSSAAGASP
NAVSPYSFHGTSPGSLAMNVPAYSACATSSTSYIGGGNQRLGSLPMKASYPGTFSSPVHH
YHGEGASAAGFAGEFGSLQSPTQINGLSNNPYMRSSAAGYGGFERYIPTI
Nucleotide sequence
Length: 3,569
>Phmamm.CG.MTP2014.S1138.g13832.01.t
ATAAAACTATTTTGTATTACAACCGAGATTCGATTTGTCCGCAGTAAAGTCACTACAGGT
TGAGAAATGTATAAGTTATTTCATTTGTAACACGATATCAGATAAAGTTTTTCACCGTAA
TGCCGTTGTTAAATGTAGTCTTATCTATGCCTAATGAAACAAATTAGGCCATACATATAT
TTTGGGGGGTTCACGATCAGTTCTAAGCTTATAATAATAATAATAATAATAATAATAATA
ATAGTAATACTGCCGGGGTTCCTTTATAAAATTATCTGAACGCAATACAGTTTACTGAAT
TATTACTTTAACGTAGAAAAACATTTTGTAAACATCTAACTATTAAGATTAAGAGCATCC
TCAAATTTTATTCTAGTATAGCAATCACTGCTGTCTTCTTCAGAAAATCTATTATGGTAA
TAAATATTTACAGTTTATATTAAATAAAACCTGTTTATTGAGACGGTTGATGGTGTTCAT
GTTACATTAAATATTTATATTACATTTCTAAATTGAAATCGTGAAGAAAAGAAAATGTTG
ACCTATTATCCCGAGATGCAAGGAGTTCATCACCCAAATCCACACATACATGCAGTTCCA
AGTCACCACCAAACCAGCACCCAGCATTCTTCTTCAGTTGTTGGTTCGCTCTCTTCATAC
CCACACTACCATGGTCACAATTTTGCCGGGCAACATCATTTCACCCATTCCGGCTCAAAC
ATGATCGATCGGCATTATGTGCAGATGCAGACTCACTTGGCATCACCCTTCGCAGCACGC
AACCTGGCGCCACCACCTTCAGCCCACCAACCGCAACATGCCGACTCATGTCAAATTAGC
GGCACGAGTTGCAATGAAAGTTTGCCGTCTCCGTCATGTGTTTCTGCGTACCAACAAGAA
GGTTCCATGCCACAACCTACAGCAGAGCAGGCAAATTATCACACTTATAGCGAATCGCCA
CTTGTTGGTGGGGGTCAGGAACGAGTTTGCAACAGTCACCATTCAGCAGAATCGCTCAAC
CAGGAATCGATTTGCGATATTGGCGAGGATAATCGTGAACTTGATGTTGGTGTCCCAAAA
GAAAGTGACTGCAGCATGAGCGAACATGACGGTTTGCTTACAGAAACTGGCGACGAAGAG
GACAAACAGAATAGGGAGAAAAACCAATGTTGCGATTCTACGACCAATGACGCTAAGCCG
AATGAAGCCGATGTTGTTACAACTACCAGTTCCGGTAGACGCCGAAAGCGACCCATTCAG
CGTGGCAAGCCACCTTACAGCTATATTGCCTTGATTTCTATGGCAATTGCCAGCTCACCT
GAGCGCAAGCTTACCTTAGGACATATTTACAAGTTCATTATGGAGCGCTTCCCATTCTAT
CGCGAACAAAACAAGAAATGGCAAAACTCGATTCGCCATAACCTGACCCTAAACGATTGC
TTCATTAAGTTGCCTCGCGAACCGGGGAAGCCTGGAAAGGGCAATTACTGGACATTGGAC
CCAGCTGCTGAAGACATGTTTGACAACGGTTCGTTCCTTCGTCGTCGAAAGCGATTTAAG
CGTTCTGAATCAGAGAAAGCCCTGCTGAACACTTACATGCAAGATCAAAGTGCATTTACC
CCAACTAATGCCATGAAAGCATATGGTCCCCCTCATCCATCAGCCAACACATACTACCCA
CAACATGGTATGATGACTAGCAACTATTTGTCGCCTATAATGCATTCTGTAGGTGGTACC
ATGCCCCATCAAATGCTTACGCACTACCCACCACCAATGGCGTCACCCACAACGGCCAAC
CCCCGAATGTTTAGCATCGAGAACATTATNATGCAAGATCAAAGTGCATTTACCCCAACT
AATGCCATGAAAGCATATGGTCCCCCTCATCCATCAGCCAACACATACTACCCACAACAT
GGTATGATGACTAGCAACTATTTGTCGCCTATAATGCATTCTGTAGGTGGTACCATGCCC
CATCAAATGCTTACGCACTACCCACCACCAATGGCGTCACCCACAACGGCCAACCCCCGA
ATGTTTAGCATCGAGAACATTATCGGCCACCCAAGCAGACCTGGCGAGGTGGCGGCGGGC
GAGATGTCGAGCTCGCTGTATTTGGAATCGAACAGAAGCGACGGCCTTAATCCGCCTGTG
CCTAATCCGGCAATGATTCACCCTGAACGGGATTCGGCTGTGACGAGCAATCCACAGAGT
CACGAAGCAACTCCAGCAATCCACAGCAACCTGAGTCCATCGACTGGGTACACATCAGGA
ATGGGTGGTTCATCCCTAAGGGGAATGCCAAGCAGCGCAGCCGGTGCGTCACCGAACGCG
GTCTCGCCTTACTCCTTTCACGGTACTTCGCCAGGCTCTCTCGCGATGAACGTGCCGGCA
TATTCGGCCTGTGCTACATCAAGTACTTCCTACATCGGCGGTGGGAATCAGCGGCTCGGA
TCTCTGCCAATGAAAGCGTCCTACCCCGGCACCTTCTCGAGCCCTGTTCACCATTACCAC
GGTGAGGGAGCATCTGCTGCCGGTTTTGCAGGCGAGTTTGGAAGCCTGCAATCACCAACT
CAAATTAACGGTTTATCTAACAACCCGTACATGAGATCGTCGGCTGCGGGTTACGGTGGA
TTTGAGCGCTATATTCCCACTATTTAGTAATTTCGTACCGAATACAATGCACCTGCAAAC
CTTCGAATAAGACTAATTTTAACCGAATCCTCCCCAACTCCGAACACACCGGGTCTTACT
GTCGATAAAAATGTTATTTTGCTCAGTGTTTTGTTTTGCTGTCAAAATAAGACGCAAAAG
CAAATACATGTTAGGTCTCAATAGTAAACGTACTAAAAGCAAACTCACCCTGTGGTGACG
CACCGTCCGAGAGACGAGTAAATGTTTAAAAAGCGGCCATTTTGTTTTTTTACTTTGCCG
TTCTTTTGAAGTTTTTGTGATATTGTTGTGTCAAGCTTAAGTAATAATATCTTAATGTGG
TGTTCCTATTGAGCACACCGGCACGTTCCAGATGTACAAAAAGGTGTAATGACCCATTCG
TGTTGTTTAACTTTACATACCACCTAAACGATATTTTCATTCACGCTAAAATCACTGACA
AACGAAAATGTGATTTAATAGTGATTGCATTACTGTTTACAACTATTCTAGGAAACCTTT
TGAAATCTGTACGATGTTTTGTTACTTTGTACAACACCGTGGATTAATTACCGATACGAC
CGAAAGACATTTGCTAATTGCGTAAAGTTTCTTTTATTGCAACTTCTACCTCACTACTTC
TTGACCAAAAAATGGTCACAAAGTTTCAATGATACAGCGTCCATTGCGCCATATTTCTGT
TCAAATAATCGTGGTTACAATTTTATACTTAGCCCAACACTATGTGAACGAATTTTTCAA
GACGTTTTCGATCACTTTCTACTTCCTTATTATTTTTTGACTGGTTGTTGTCTTTTTGCA
ACACACGGCATCGGTGGTGTGCCTTTTATGTAGTCATATCCAATTAGCGCAATGCTTCTA
GTGCTTGCCTTTAAAAAATGTAGTACCGT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[243-344] 9.6E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[243-333] 2.3E-59 |
| PRINTS |
Fork_head_dom (IPR001766) - T[245-258] 4.1E-22 - T[266-283] 4.1E-22 - T[289-306] 4.1E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[245-329] 2.2E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[245-322] 4.77233E-48 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[245-258] . |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[245-339] 1.86E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[245-339] 40.344 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[289-295] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXE1_HUMAN | 80.851 % | 179 | 3.82E-50 |
| FOXB1_HUMAN | 66.99 % | 166 | 4.32E-46 |
| FOXD4_HUMAN | 71.569 % | 172 | 7.09E-47 |
