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  1. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1131.g13809.01.t

Possible name(s)

LEMD2

Gene model

Phmamm.CG.MTP2014.S1131.g13809

Location

S1131 [27,748 / 33,213]

Sequences

Amino acid sequence

Length: 456

>Phmamm.CG.MTP2014.S1131.g13809.01.p
NDNGVCVVTKLLAIRLIMTSLNLSDRELRQELLSLGEKVGPITSSTRNLYIKRLTKIRNL
LNEDIPLTVESNSKNGNQQNLKKLKQTKIKPQRKTFGFSSDESDNNEDTARRQTSGMSLR
RRSHQPTMKLLTSKSLPSTPSRKPMHKNVLGLIPGNRSVKKSPVVTNGYSDDSDEEENSS
WSEVLTADISTSPLPSYNSSPVKSSLTPRRPLRKSRASLDATPLRSARKNQFDDEHDIHD
DRTDIGNGSAIVSQVEENSAEERVKLGYDATTQRQSSKTQTITQENSNPFLHLWRKVSKN
NDSVKHRESNGFVQTERPSQQWHLHCSALLPIGTIVFFVVLGLLYVTLRSDEAIIPKPAL
PHHPTSTDDHNIMEVIHQIYQELASKAGEFVCNSQVTSDLVSVSSLKSLIKLDDLEFLKA
LQLIQDNPEWRLNMYIXRHNAPSVLGRAPSIKVRCS

Nucleotide sequence

Length: 1,370

>Phmamm.CG.MTP2014.S1131.g13809.01.t
GAACGATAATGGGGTTTGTGTGGTGACAAAACTTCTTGCTATAAGGCTCATTATGACATC
ACTAAATCTAAGTGACCGTGAACTTCGGCAGGAATTATTGAGTTTGGGTGAAAAAGTTGG
ACCCATAACATCAAGTACAAGGAATCTGTACATAAAAAGACTCACCAAAATAAGAAATTT
ACTGAATGAAGACATCCCATTGACAGTGGAAAGCAATTCAAAAAATGGAAACCAGCAAAA
CTTGAAGAAATTGAAACAGACCAAAATTAAGCCACAAAGAAAAACATTTGGTTTTAGTTC
AGACGAAAGTGATAACAATGAAGACACGGCAAGGAGACAAACTAGTGGAATGTCGTTAAG
ACGAAGATCGCACCAACCAACAATGAAACTATTGACCTCTAAAAGTTTGCCATCAACGCC
CTCCAGAAAACCCATGCATAAAAACGTACTTGGATTAATTCCGGGAAATCGGAGTGTGAA
GAAAAGTCCAGTTGTTACCAACGGATACTCAGATGATTCTGATGAGGAGGAAAATTCGTC
ATGGAGCGAAGTTCTAACTGCTGACATCAGCACTTCTCCGTTACCGAGTTATAACTCATC
TCCGGTAAAATCATCTCTCACACCACGTCGTCCATTGCGTAAATCCCGAGCTTCTCTGGA
TGCGACTCCTCTTCGCAGTGCGAGAAAAAATCAGTTCGATGACGAACATGACATCCATGA
TGACAGAACAGACATTGGCAATGGTAGTGCCATCGTATCACAAGTTGAAGAAAATTCAGC
GGAGGAGCGTGTAAAGCTGGGTTACGATGCCACAACACAAAGGCAATCATCAAAAACACA
AACAATTACCCAAGAAAATTCAAATCCCTTCTTGCATTTGTGGAGAAAAGTATCCAAAAA
CAATGACTCAGTGAAGCACAGAGAGTCGAACGGTTTCGTTCAGACCGAACGACCGTCCCA
GCAGTGGCACCTTCATTGTTCAGCTCTGCTACCTATTGGTACAATTGTGTTTTTTGTTGT
TCTTGGACTCTTGTATGTTACCTTGCGTTCTGATGAAGCCATCATCCCAAAGCCAGCTCT
GCCCCACCATCCAACATCAACTGATGATCACAACATCATGGAAGTGATTCATCAAATATA
TCAAGAACTTGCCTCAAAAGCTGGTGAATTTGTATGCAACAGCCAAGTAACTTCTGATCT
CGTTTCAGTTTCAAGTCTGAAGTCTTTGATCAAGCTTGATGATTTGGAATTTTTGAAAGC
GCTTCAGTTAATACAGGATAACCCTGAATGGAGATTGAATATGTACATANGACGTCATAA
TGCACCGAGCGTGCTCGGCCGAGCACCGAGCATTAAAGTGAGATGCTCGG

InterProScan

ProSiteProfiles
LEM_dom (IPR003887) - T[17-61] 13.682
Gene3D
LEM/LEM-like_dom_sf (IPR011015) - T[18-63] 4.8E-12
SMART
LEM_dom (IPR003887) - T[18-61] 1.8E-8
Pfam
LEM_dom (IPR003887) - T[22-57] 8.5E-15
SUPERFAMILY
LEM/LEM-like_dom_sf (IPR011015) - T[22-57] 5.3E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value