- Transcript 'Moocul.CG.ELv1_2.S59...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1119.g13754.02.t
Possible name(s)
HNRNPL; HNRNPLL
Gene model
Location
S1119 [13,760 / 17,962]
Amino acid sequence
Length: 403
>Phmamm.CG.MTP2014.S1119.g13754.02.p
MASYEGHQAKRQRLSENGASSATDEYRGEREHKFREGPDQPNKVLLFTIMNAVYPITTSA
QRAKASLNGADIYSGCCTLKIEWAKPARLNVYKNDDETWDYTGALDAPETPSQPALLGDA
PAGYSNAPGYGARPPRSMPGRGRPMMPRGRGMMPPRPPRPGLMGVTSNNTMGGGDYMEDY
GGQDMGGFNQSPVLMVYGLNPDKMNCDRLFNILCLYGNVMKIKFLKSKPGTAMVQMGNPA
AVERAIGSLSGMKFFDDKMVVGHSKQMYLTDTGAPVSEQADGSPSQMDYSNSRNNRFTTT
EQAAKNRIQNPSKVLHYYNAPVDFDEDKMKEICTEFSLVEPKKFTPFKSKSERSSSGLME
FETKPEALEVLTMVNHYKMENPNGRFPYILKLCFSTSSTATRE
Nucleotide sequence
Length: 1,212
>Phmamm.CG.MTP2014.S1119.g13754.02.t
ATGGCTTCATACGAAGGGCATCAGGCAAAGCGCCAAAGATTGTCAGAAAATGGAGCATCC
AGTGCAACGGATGAATACAGAGGGGAAAGAGAACACAAGTTTAGGGAAGGACCTGACCAG
CCAAACAAAGTTCTCCTGTTTACAATAATGAATGCAGTGTATCCAATTACCACTTCTGCT
CAACGGGCCAAAGCATCTCTAAATGGTGCTGATATTTATTCTGGTTGTTGTACTCTTAAA
ATTGAATGGGCAAAGCCTGCAAGACTTAATGTTTACAAGAATGACGATGAAACATGGGAT
TACACTGGTGCTTTGGATGCACCAGAAACCCCAAGTCAACCAGCTTTACTTGGAGATGCT
CCAGCAGGTTACAGTAATGCCCCTGGGTATGGGGCAAGACCTCCAAGGAGTATGCCTGGG
AGAGGTCGTCCAATGATGCCAAGAGGAAGGGGAATGATGCCACCAAGACCACCTCGTCCT
GGTCTGATGGGCGTCACATCCAATAACACCATGGGCGGTGGTGATTACATGGAGGACTAC
GGAGGCCAAGATATGGGTGGTTTCAACCAAAGTCCTGTACTTATGGTTTATGGATTAAAC
CCTGACAAGATGAATTGTGACAGATTGTTCAATATCCTTTGTCTCTATGGCAATGTGATG
AAGATAAAGTTTTTAAAAAGCAAGCCTGGCACTGCCATGGTGCAGATGGGCAACCCGGCT
GCTGTGGAAAGAGCAATTGGTAGCCTTTCTGGGATGAAGTTTTTTGACGACAAAATGGTA
GTTGGACATTCGAAGCAAATGTATCTTACAGACACTGGGGCTCCTGTGAGCGAACAAGCT
GATGGATCGCCCAGCCAAATGGATTACTCAAATTCACGAAATAACAGATTTACAACCACA
GAGCAAGCAGCTAAAAACAGAATTCAAAACCCATCCAAGGTTCTTCACTACTACAATGCT
CCTGTAGATTTTGATGAGGATAAGATGAAAGAGATCTGTACGGAGTTCAGTCTTGTGGAG
CCCAAAAAATTTACACCATTTAAATCTAAAAGTGAACGAAGTTCCTCTGGCCTAATGGAG
TTTGAGACAAAGCCAGAAGCTCTTGAGGTGCTTACAATGGTGAACCATTACAAGATGGAG
AACCCAAATGGTCGATTCCCTTACATCCTGAAGCTGTGTTTTTCCACATCTTCCACTGCC
ACAAGAGAATAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[57-105] 1.1E-13 - T[186-290] 2.9E-28 - T[301-394] 1.2E-34 |
| TIGRFAM |
HnRNP-L/PTB (IPR006536) - T[58-398] 9.4E-94 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[179-265] 2.55E-13 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[192-266] 9.712 |
| SMART |
RRM_dom (IPR000504) - T[193-262] 9.3E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTBP3_HUMAN | 29.121 % | 112 | 5.27E-27 |
| HNRPL_HUMAN | 46.905 % | 329 | 6.46E-108 |
| HNRLL_HUMAN | 40.447 % | 277 | 1.95E-88 |