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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.412.v1....' > 
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  3. Transcript 'Phmamm.CG.MTP2014.S1...'
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Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1116.g13738.01.t

Possible name(s)

PPIL4; SNRNP35; SNRNP70

Gene model

Phmamm.CG.MTP2014.S1116.g13738

Location

S1116 [15,858 / 16,479]

Sequences

Amino acid sequence

Length: 206

>Phmamm.CG.MTP2014.S1116.g13738.01.p
MMSEKRSSSKWQPFATEYDPLKCGSIDGTDTQVHDKAISRAITSEYKPNPTVKGNPECTV
FVAKLNHATTEQTLRQIFGSFGAVVKATVIRDYVTGFPRGYGFVEFATSTDAREAYHDAH
QLVIDGNSIVVDYEHGRLMKGWKPRRLGGGFGGKKESGQLRFGCRDRPFKRPITLDKHRP
SAPYRRRQNETDQRQSFSKKREHHRR

Nucleotide sequence

Length: 621

>Phmamm.CG.MTP2014.S1116.g13738.01.t
ATGATGAGTGAAAAAAGGAGCTCTTCTAAATGGCAACCATTCGCAACTGAGTATGACCCA
TTGAAATGTGGCAGCATTGATGGAACTGATACACAAGTGCATGACAAAGCCATCAGCAGG
GCAATAACTTCTGAATATAAACCAAATCCAACAGTAAAAGGAAACCCGGAATGCACTGTT
TTTGTAGCAAAGCTAAATCATGCAACTACAGAACAAACATTAAGACAAATATTTGGAAGT
TTTGGAGCTGTTGTCAAGGCAACAGTCATTCGGGATTATGTCACTGGTTTCCCAAGAGGT
TATGGTTTTGTTGAGTTTGCGACTTCAACTGATGCTCGAGAAGCTTACCATGATGCGCAT
CAACTTGTTATTGATGGAAATTCCATCGTGGTGGATTATGAGCATGGTCGACTAATGAAA
GGTTGGAAACCTAGGAGACTGGGAGGTGGCTTTGGTGGAAAAAAGGAATCTGGACAGTTA
AGATTTGGTTGTAGGGATCGTCCGTTTAAAAGGCCAATAACTCTGGACAAACACAGACCA
TCTGCTCCTTACAGAAGGCGACAGAACGAAACAGATCAAAGACAATCATTTAGCAAAAAA
CGTGAACATCACAGACGATAA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[47-167] 1.3E-31
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[49-161] 2.17E-27
ProSiteProfiles
RRM_dom (IPR000504) - T[58-136] 16.722
SMART
RRM_dom (IPR000504) - T[59-132] 1.6E-20
Pfam
RRM_dom (IPR000504) - T[60-129] 6.0E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
U1SBP_HUMAN 55.09 % 176 1.93E-55