- Transcript 'Cisavi.CG.ENS81.R60....' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S110.g03396.03.t
Possible name(s)
SIX2; SIX3; SIX6
Gene model
Location
S110 [29,423 / 31,655]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S110.g03396.03.p
RVMTSPHGQTLSPDSSLAKLFAASSPEVRANLGVIGSNPRPDILAAAAALRNLLNQSFLQ
QNAAPSLPALTFNPTQIATVCESLQESGDIERLARFLWSLPAAPGVLEVLNNNEAVLRAR
AIVAYHQGQYRDLYAILENHRFTEKDSHSKLQAMWLEAHYQEAEKLRGRPLGPVDKYRIR
KKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRELAHATGLTPTQVGNWF
KNRRQRDRAAAAKNSRIRNESTSPQPQPKNTSPASYAHDLLRHYPDTSGMLWSAGKFPNF
PLNFSAYKFPTAENQVSPSARRSAFHSPYFLAMPNLTSPKEAVTSPDEVMTSPTMSNKSD
SRSASPVSPQSRCDDTMY
Nucleotide sequence
Length: 1,135
>Phmamm.CG.MTP2014.S110.g03396.03.t
CGAGTGATGACGTCACCACACGGGCAGACTCTTTCGCCTGATTCAAGTTTGGCAAAATTA
TTCGCTGCCTCGTCGCCGGAAGTTCGAGCCAATCTTGGGGTTATTGGTTCAAACCCCAGG
CCCGATATCTTAGCCGCCGCTGCCGCGCTAAGGAATTTGCTCAATCAGAGTTTTTTGCAG
CAAAACGCGGCGCCGTCGCTTCCAGCTTTGACCTTTAACCCGACTCAAATCGCCACGGTT
TGCGAGAGTTTACAGGAGAGTGGTGACATTGAGCGCTTGGCCCGATTTTTGTGGTCTTTG
CCCGCTGCACCTGGCGTCTTGGAGGTCCTTAACAACAATGAAGCTGTCCTACGGGCCAGG
GCTATCGTGGCCTACCATCAGGGCCAGTACCGCGACTTGTACGCCATTTTGGAAAATCAT
CGATTCACGGAAAAGGATTCGCATAGCAAATTGCAGGCGATGTGGTTAGAAGCTCATTAC
CAAGAAGCAGAGAAGTTGCGGGGAAGACCTCTCGGACCAGTTGATAAATACAGAATCAGA
AAGAAGTTTCCACTTCCCAGAACAATATGGGACGGTGAACAAAAGACCCATTGCTTCAAG
GAACGCACCCGCAGTCTCCTCAGGGAGTGGTACCTTCAGGACCCCTATCCCAACCCCACC
AAGAAGCGGGAACTGGCCCATGCCACCGGCCTTACTCCAACACAAGTCGGAAACTGGTTC
AAAAACAGAAGGCAAAGGGACCGAGCGGCCGCCGCAAAAAACAGTCGCATCCGAAACGAA
TCCACCAGTCCCCAGCCACAACCAAAAAACACATCGCCTGCGTCATACGCACACGACCTC
CTACGTCACTACCCGGATACGTCAGGCATGCTGTGGTCGGCAGGAAAATTTCCCAACTTT
CCCCTCAACTTTTCAGCATACAAATTTCCTACGGCAGAGAACCAGGTTTCCCCCTCAGCC
CGCCGAAGCGCTTTTCACTCTCCCTATTTTCTCGCCATGCCCAATCTGACGTCACCCAAA
GAAGCAGTGACGTCACCAGATGAGGTGATGACGTCACCAACCATGTCGAATAAAAGCGAT
TCGCGTTCCGCTTCGCCGGTTTCGCCGCAATCGCGCTGTGACGACACAATGTACA
| Pfam |
SIX1_SD (IPR031701) - T[72-187] 3.7E-45 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[190-250] 14.592 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[190-250] 3.51E-16 |
| SMART |
Homeobox_dom (IPR001356) - T[193-254] 8.9E-14 |
| CDD |
Homeobox_dom (IPR001356) - T[194-242] 4.5511E-12 |
| Pfam |
Homeobox_dom (IPR001356) - T[197-248] 3.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIX2_HUMAN | 61.244 % | 268 | 1.89E-88 |
| SIX6_HUMAN | 83.511 % | 323 | 1.12E-110 |
| SIX3_HUMAN | 75.472 % | 328 | 2.21E-111 |