- Transcript 'NCBI:KH.XM_018812362...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- EST 'AHC0AAA229YL16_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S110.g03396.02.t
Possible name(s)
SIX2; SIX3; SIX6
Gene model
Location
S110 [29,373 / 31,703]
Amino acid sequence
Length: 410
>Phmamm.CG.MTP2014.S110.g03396.02.p
MLVGRSEHQDAAKISPRVMTSPHGQTLSPDSSLAKLFAASSPEVRANLGVIGSNPRPDIL
AAAAALRNLLNQSFLQQNAAPSLPALTFNPTQIATVCESLQESGDIERLARFLWSLPAAP
GVLEVLNNNEAVLRARAIVAYHQGQYRDLYAILENHRFTEKDSHSKLQAMWLEAHYQEAE
KLRGRPLGPVDKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPTKKRE
LAHATGLTPTQVGNWFKNRRQRDRAAAAKNSRIRNESTSPQPQPKNTSPASYAHDLLRHY
PDTSGMLWSAGKFPNFPLNFSAYKFPTAENQVSPSARRSAFHSPYFLAMPNLTSPKEAVT
SPDEVMTSPTMSNKSDSRSASPVSPQSRCDDTMYKSDVMEETQQKTCVAN
Nucleotide sequence
Length: 1,233
>Phmamm.CG.MTP2014.S110.g03396.02.t
ATGTTGGTTGGACGAAGCGAGCACCAGGACGCAGCGAAAATCTCACCGCGAGTGATGACG
TCACCACACGGGCAGACTCTTTCGCCTGATTCAAGTTTGGCAAAATTATTCGCTGCCTCG
TCGCCGGAAGTTCGAGCCAATCTTGGGGTTATTGGTTCAAACCCCAGGCCCGATATCTTA
GCCGCCGCTGCCGCGCTAAGGAATTTGCTCAATCAGAGTTTTTTGCAGCAAAACGCGGCG
CCGTCGCTTCCAGCTTTGACCTTTAACCCGACTCAAATCGCCACGGTTTGCGAGAGTTTA
CAGGAGAGTGGTGACATTGAGCGCTTGGCCCGATTTTTGTGGTCTTTGCCCGCTGCACCT
GGCGTCTTGGAGGTCCTTAACAACAATGAAGCTGTCCTACGGGCCAGGGCTATCGTGGCC
TACCATCAGGGCCAGTACCGCGACTTGTACGCCATTTTGGAAAATCATCGATTCACGGAA
AAGGATTCGCATAGCAAATTGCAGGCGATGTGGTTAGAAGCTCATTACCAAGAAGCAGAG
AAGTTGCGGGGAAGACCTCTCGGACCAGTTGATAAATACAGAATCAGAAAGAAGTTTCCA
CTTCCCAGAACAATATGGGACGGTGAACAAAAGACCCATTGCTTCAAGGAACGCACCCGC
AGTCTCCTCAGGGAGTGGTACCTTCAGGACCCCTATCCCAACCCCACCAAGAAGCGGGAA
CTGGCCCATGCCACCGGCCTTACTCCAACACAAGTCGGAAACTGGTTCAAAAACAGAAGG
CAAAGGGACCGAGCGGCCGCCGCAAAAAACAGTCGCATCCGAAACGAATCCACCAGTCCC
CAGCCACAACCAAAAAACACATCGCCTGCGTCATACGCACACGACCTCCTACGTCACTAC
CCGGATACGTCAGGCATGCTGTGGTCGGCAGGAAAATTTCCCAACTTTCCCCTCAACTTT
TCAGCATACAAATTTCCTACGGCAGAGAACCAGGTTTCCCCCTCAGCCCGCCGAAGCGCT
TTTCACTCTCCCTATTTTCTCGCCATGCCCAATCTGACGTCACCCAAAGAAGCAGTGACG
TCACCAGATGAGGTGATGACGTCACCAACCATGTCGAATAAAAGCGATTCGCGTTCCGCT
TCGCCGGTTTCGCCGCAATCGCGCTGTGACGACACAATGTACAAGAGTGACGTCATGGAG
GAGACGCAACAGAAAACGTGCGTCGCAAATTGA
| Pfam |
SIX1_SD (IPR031701) - T[88-203] 4.3E-45 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[206-266] 14.592 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[206-266] 3.97E-16 |
| SMART |
Homeobox_dom (IPR001356) - T[209-270] 8.9E-14 |
| CDD |
Homeobox_dom (IPR001356) - T[210-258] 4.72093E-12 |
| Pfam |
Homeobox_dom (IPR001356) - T[213-264] 4.1E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SIX2_HUMAN | 61.244 % | 268 | 3.56E-88 |
| SIX6_HUMAN | 83.511 % | 324 | 1.66E-110 |
| SIX3_HUMAN | 75.472 % | 328 | 4.6E-111 |