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TRANSCRIPT CARD

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  1. Region 'REG00000366'
  2. Molecular Tool 'Neurogenin-MO (Imai 2009)'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S1105.g13699.01.t

Possible name(s)

DLX1; DLX5; DLX6

Location

S1105 [37,954 / 50,658]

Sequences

Amino acid sequence

Length: 407

>Phmamm.CG.MTP2014.S1105.g13699.01.p
SQMSAYGYSYEPTPASGYLGNARGPSGFGNPVGGSYGMPGSTYASPYGGTSQHGAIQGIT
ASVASGVSPVSNHHPHSMQTSTSGYSAPPPPPLGPGAGGFPGFSSAYGPPSHSSYGGLMN
QYPNCGSLSDAVLHQDSNHVMGSDVMMTKGKKKKMRKPRTIYSSLQLQALNRRFQQTQYL
ALPERAELAATLGLTQTQVKIWFQNRRSKCKKLMKQGIHDKDNPMVSPGSNSSNTNNNAG
SPSSITSPMMSSVPPTTSSDLETPGSVGPAPVGADTGVPGSMGGGTWTPNSTDEQPSPTP
PDVMTPNRGMTSPPITSPYHMMTPLHSMTTSMKSEMSSPLPSNGGSPGMLPPYTHPGGVS
RDIQGGYMPQPMHGGQGAMMQGNFWYSGSEHDPIEPRPAMRETAYLK

Nucleotide sequence

Length: 1,596

>Phmamm.CG.MTP2014.S1105.g13699.01.t
AGCCAAATGAGTGCTTATGGCTACAGCTACGAACCAACCCCGGCATCGGGATATCTCGGC
AACGCTCGCGGGCCTTCGGGCTTCGGAAACCCGGTCGGAGGCAGCTACGGGATGCCGGGC
TCGACTTATGCGTCGCCTTACGGTGGGACAAGTCAGCACGGAGCGATCCAGGGCATCACA
GCGTCTGTAGCTTCCGGGGTCAGCCCAGTTTCGAACCATCATCCTCACAGTATGCAGACC
TCTACTTCGGGTTACTCTGCCCCTCCACCCCCGCCTCTTGGGCCTGGGGCCGGTGGTTTC
CCGGGGTTCTCGTCGGCGTACGGACCCCCAAGTCACTCGTCGTACGGGGGCCTGATGAAC
CAATACCCAAACTGCGGGAGTCTAAGCGACGCCGTTCTACACCAAGATTCAAATCACGTG
ATGGGAAGTGACGTAATGATGACAAAAGGAAAGAAAAAGAAAATGCGAAAACCTCGAACG
ATATACTCGAGTCTCCAGTTGCAAGCTTTGAACAGAAGATTCCAGCAAACTCAGTATTTG
GCTTTGCCAGAACGGGCCGAACTCGCCGCCACGCTCGGACTCACGCAGACCCAGGTGAAA
ATCTGGTTCCAAAACCGACGCTCCAAGTGCAAGAAGCTGATGAAGCAGGGAATCCACGAT
AAAGACAACCCCATGGTGTCGCCAGGAAGCAACAGCAGCAACACAAACAACAACGCCGGT
TCACCATCCTCTATTACGTCACCTATGATGTCATCCGTGCCGCCTACTACGTCATCGGAT
CTCGAAACGCCGGGCAGTGTGGGTCCAGCGCCGGTTGGGGCCGATACAGGGGTACCTGGG
TCGATGGGAGGCGGAACCTGGACTCCAAACTCAACAGACGAGCAACCCTCACCCACCCCT
CCTGACGTAATGACCCCCAACCGCGGTATGACGTCACCACCGATTACGTCACCGTATCAT
ATGATGACGCCGCTTCACAGTATGACCACATCGATGAAAAGCGAAATGTCGTCGCCCCTG
CCCTCGAACGGGGGGAGTCCCGGTATGTTACCACCCTACACCCACCCTGGAGGAGTGTCA
CGTGATATACAAGGCGGCTACATGCCCCAACCCATGCACGGGGGTCAGGGCGCCATGATG
CAGGGTAATTTCTGGTACTCGGGTTCAGAACACGACCCTATCGAACCCCGCCCCGCGATG
AGAGAAACAGCCTACCTTAAATAAGGCAAAAATCAAAAAAATCATGATTATTTTGCACAA
TCCCCTTCTCCTTACCCCGTTCTGCATAAGAGAGCATGTAAATACGTCATCTCCGCTATT
TATCCCCCTACCGGAAGTGACGGGACTCGCTTCCACAACGGTCTGGTATCGTTCCCTTTT
GTTTAGTCATAATGCGCCATTATTACGTCGCCATTCAATCTACGGTGTGTAGTTGATTTC
TATGTTGATTCGTGCCTGATCCGCACGAGGTCGCTCTTGAACATGTATTTGTTTGCTCAA
GAGATCTTTTTATATTATGACGTAGTAATAGGCCGCTATGACGTGACTGATAGCATTATC
AGGCGAAAAGTTTGTTTTTGTTGCAAAGCAATTCAT

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[139-213] 2.95E-23
ProSiteProfiles
Homeobox_dom (IPR001356) - T[153-213] 19.856
SMART
Homeobox_dom (IPR001356) - T[155-217] 4.4E-25
Pfam
Homeobox_dom (IPR001356) - T[156-212] 1.9E-20
CDD
Homeobox_dom (IPR001356) - T[158-212] 6.57279E-22
PRINTS
Homeobox_metazoa (IPR020479) - T[177-188] 2.1E-6 - T[192-202] 2.1E-6 - T[202-211] 2.1E-6
PRINTS
HTH_motif (IPR000047) - T[184-193] 2.7E-8 - T[193-209] 2.7E-8
ProSitePatterns
Homeobox_CS (IPR017970) - T[188-211] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLX1_HUMAN 66.087 % 140 2.95E-39
DLX6_HUMAN 61.261 % 132 7.93E-37
DLX5_HUMAN 58.4 % 137 1.85E-37