- Region 'REG00000366' >
- Molecular Tool 'Neurogenin-MO (Imai 2009)' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1105.g13699.01.t
Possible name(s)
DLX1; DLX5; DLX6
Gene model
Location
S1105 [37,954 / 50,658]
Amino acid sequence
Length: 407
>Phmamm.CG.MTP2014.S1105.g13699.01.p
SQMSAYGYSYEPTPASGYLGNARGPSGFGNPVGGSYGMPGSTYASPYGGTSQHGAIQGIT
ASVASGVSPVSNHHPHSMQTSTSGYSAPPPPPLGPGAGGFPGFSSAYGPPSHSSYGGLMN
QYPNCGSLSDAVLHQDSNHVMGSDVMMTKGKKKKMRKPRTIYSSLQLQALNRRFQQTQYL
ALPERAELAATLGLTQTQVKIWFQNRRSKCKKLMKQGIHDKDNPMVSPGSNSSNTNNNAG
SPSSITSPMMSSVPPTTSSDLETPGSVGPAPVGADTGVPGSMGGGTWTPNSTDEQPSPTP
PDVMTPNRGMTSPPITSPYHMMTPLHSMTTSMKSEMSSPLPSNGGSPGMLPPYTHPGGVS
RDIQGGYMPQPMHGGQGAMMQGNFWYSGSEHDPIEPRPAMRETAYLK
Nucleotide sequence
Length: 1,596
>Phmamm.CG.MTP2014.S1105.g13699.01.t
AGCCAAATGAGTGCTTATGGCTACAGCTACGAACCAACCCCGGCATCGGGATATCTCGGC
AACGCTCGCGGGCCTTCGGGCTTCGGAAACCCGGTCGGAGGCAGCTACGGGATGCCGGGC
TCGACTTATGCGTCGCCTTACGGTGGGACAAGTCAGCACGGAGCGATCCAGGGCATCACA
GCGTCTGTAGCTTCCGGGGTCAGCCCAGTTTCGAACCATCATCCTCACAGTATGCAGACC
TCTACTTCGGGTTACTCTGCCCCTCCACCCCCGCCTCTTGGGCCTGGGGCCGGTGGTTTC
CCGGGGTTCTCGTCGGCGTACGGACCCCCAAGTCACTCGTCGTACGGGGGCCTGATGAAC
CAATACCCAAACTGCGGGAGTCTAAGCGACGCCGTTCTACACCAAGATTCAAATCACGTG
ATGGGAAGTGACGTAATGATGACAAAAGGAAAGAAAAAGAAAATGCGAAAACCTCGAACG
ATATACTCGAGTCTCCAGTTGCAAGCTTTGAACAGAAGATTCCAGCAAACTCAGTATTTG
GCTTTGCCAGAACGGGCCGAACTCGCCGCCACGCTCGGACTCACGCAGACCCAGGTGAAA
ATCTGGTTCCAAAACCGACGCTCCAAGTGCAAGAAGCTGATGAAGCAGGGAATCCACGAT
AAAGACAACCCCATGGTGTCGCCAGGAAGCAACAGCAGCAACACAAACAACAACGCCGGT
TCACCATCCTCTATTACGTCACCTATGATGTCATCCGTGCCGCCTACTACGTCATCGGAT
CTCGAAACGCCGGGCAGTGTGGGTCCAGCGCCGGTTGGGGCCGATACAGGGGTACCTGGG
TCGATGGGAGGCGGAACCTGGACTCCAAACTCAACAGACGAGCAACCCTCACCCACCCCT
CCTGACGTAATGACCCCCAACCGCGGTATGACGTCACCACCGATTACGTCACCGTATCAT
ATGATGACGCCGCTTCACAGTATGACCACATCGATGAAAAGCGAAATGTCGTCGCCCCTG
CCCTCGAACGGGGGGAGTCCCGGTATGTTACCACCCTACACCCACCCTGGAGGAGTGTCA
CGTGATATACAAGGCGGCTACATGCCCCAACCCATGCACGGGGGTCAGGGCGCCATGATG
CAGGGTAATTTCTGGTACTCGGGTTCAGAACACGACCCTATCGAACCCCGCCCCGCGATG
AGAGAAACAGCCTACCTTAAATAAGGCAAAAATCAAAAAAATCATGATTATTTTGCACAA
TCCCCTTCTCCTTACCCCGTTCTGCATAAGAGAGCATGTAAATACGTCATCTCCGCTATT
TATCCCCCTACCGGAAGTGACGGGACTCGCTTCCACAACGGTCTGGTATCGTTCCCTTTT
GTTTAGTCATAATGCGCCATTATTACGTCGCCATTCAATCTACGGTGTGTAGTTGATTTC
TATGTTGATTCGTGCCTGATCCGCACGAGGTCGCTCTTGAACATGTATTTGTTTGCTCAA
GAGATCTTTTTATATTATGACGTAGTAATAGGCCGCTATGACGTGACTGATAGCATTATC
AGGCGAAAAGTTTGTTTTTGTTGCAAAGCAATTCAT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[139-213] 2.95E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[153-213] 19.856 |
| SMART |
Homeobox_dom (IPR001356) - T[155-217] 4.4E-25 |
| Pfam |
Homeobox_dom (IPR001356) - T[156-212] 1.9E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[158-212] 6.57279E-22 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[177-188] 2.1E-6 - T[192-202] 2.1E-6 - T[202-211] 2.1E-6 |
| PRINTS |
HTH_motif (IPR000047) - T[184-193] 2.7E-8 - T[193-209] 2.7E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[188-211] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DLX1_HUMAN | 66.087 % | 140 | 2.95E-39 |
| DLX6_HUMAN | 61.261 % | 132 | 7.93E-37 |
| DLX5_HUMAN | 58.4 % | 137 | 1.85E-37 |