Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S104.g03277.04.t

Possible name(s)

BUB3; NOL10; WDR5

Gene model

Phmamm.CG.MTP2014.S104.g03277

Location

S104 [171,140 / 177,971]

Sequences

Amino acid sequence

Length: 518

>Phmamm.CG.MTP2014.S104.g03277.04.p
HLVVVGGSDGHVECWDPRSRCRAGIMQTAAHVQDFVDDNSSAMVTALKFNGALNLAVGTS
SGQVLLYDMRNNRPFVIKDHRYDLPIHSIAFNNENNFVISSDARCVKLWQERTGEAVTAV
EMEKDINEMCLIDNSGLFFLANESPKLHTYFIPMLGPAPRWCSFLDSLTEEMEENPVHEI
YDDYKFLTQKDVESLGLSNLIGTSLLRAYMHGYFVDMRLYHKAAMIANPFAFKEYRNQKI
AEKIEEGRMKRVQIKKLPKVNKQLAERLLSRAEDQDLTSGKKKKMKREAASLLDDPRFKS
MFEDSSFQVDQESEEFRLLNPVVSKQFEKQRSNERKESSLVEATSDNENGSHSGVSSSEN
EEEERKWVKESKKAHRNVHNKTAAARERRRAEDAETTIAPRMFEIKGDEAIDGQRFSTLD
DLEKFGSEEIQLARKRKASATLGERIDEAERHMSVKTHKGPGFQMGAKQATFRVEKVDAK
QKQRTEEEKRHRDERRSVRRPANKLKRVKGGRDSFFKR

Nucleotide sequence

Length: 1,683

>Phmamm.CG.MTP2014.S104.g03277.04.t
ACCATCTAGTGGTGGTTGGGGGCAGCGACGGCCATGTTGAGTGTTGGGATCCTCGGTCGC
GATGCAGAGCTGGTATAATGCAAACTGCTGCGCATGTTCAAGATTTTGTAGATGACAATT
CTTCTGCAATGGTAACTGCTTTAAAATTCAATGGAGCTTTAAATTTGGCTGTGGGCACTA
GTTCTGGACAAGTGCTGCTATATGATATGAGAAACAATCGACCATTTGTAATCAAGGACC
ATCGCTATGACTTACCGATTCACTCGATAGCATTTAACAATGAAAACAACTTCGTAATTT
CATCAGATGCTCGCTGTGTTAAGTTGTGGCAGGAAAGAACTGGTGAAGCTGTAACTGCTG
TTGAAATGGAAAAAGACATCAATGAAATGTGTCTGATTGACAATTCTGGACTCTTCTTTC
TCGCAAATGAAAGCCCCAAGCTTCACACTTATTTTATACCAATGCTGGGTCCAGCCCCCA
GATGGTGTTCTTTCCTTGACAGTTTGACGGAAGAAATGGAAGAAAATCCAGTGCATGAAA
TATATGATGATTACAAGTTTCTCACCCAGAAGGACGTGGAGTCACTTGGTTTGTCGAATT
TGATTGGTACTTCGTTGCTACGTGCTTACATGCATGGTTACTTCGTTGATATGAGACTCT
ACCACAAGGCAGCAATGATTGCAAATCCGTTTGCGTTCAAAGAATATCGCAACCAAAAGA
TTGCTGAGAAAATTGAGGAGGGTCGAATGAAGCGAGTTCAAATCAAGAAATTGCCGAAAG
TCAACAAGCAGTTGGCCGAGAGATTATTGAGTCGAGCCGAGGACCAAGATTTGACGAGTG
GAAAGAAAAAGAAAATGAAGAGAGAAGCAGCAAGTTTATTGGATGATCCACGTTTCAAGT
CAATGTTTGAAGACAGCAGTTTCCAAGTTGACCAGGAATCTGAAGAATTCAGATTACTTA
ACCCTGTTGTGTCGAAACAATTCGAAAAGCAAAGATCCAATGAGCGCAAGGAATCATCCC
TTGTCGAGGCAACAAGCGACAATGAAAACGGATCGCACTCTGGTGTTTCGTCATCTGAAA
ACGAGGAAGAAGAGAGAAAGTGGGTGAAGGAATCAAAAAAGGCGCATAGAAATGTTCACA
ATAAAACCGCAGCAGCTCGCGAGCGACGTCGTGCGGAAGATGCTGAAACGACGATTGCAC
CGCGAATGTTTGAGATCAAAGGAGACGAGGCCATCGATGGGCAAAGGTTTTCTACCTTGG
ATGACCTTGAGAAGTTCGGTAGCGAGGAAATACAACTTGCACGAAAAAGAAAAGCAAGCG
CGACCCTTGGCGAGCGGATTGATGAAGCGGAACGGCATATGAGCGTGAAAACTCACAAGG
GACCAGGATTTCAAATGGGAGCAAAACAAGCGACGTTTCGCGTAGAAAAGGTGGACGCGA
AACAGAAACAGCGGACCGAGGAAGAAAAACGTCACAGAGATGAAAGACGCTCCGTGCGTC
GGCCGGCCAATAAACTGAAGCGGGTGAAAGGGGGACGAGATTCCTTCTTTAAGCGGTGAA
TTGTTTGTTAAACACACGTTGGCGCTGCAGAGCAAGTCAATGGTCGGAAAATCGAAGAGA
TAGAGGAAACCTACGGTGCGGATTGGATGTTGCAGAAACAATTGGAATGAAATTGGAAGT
GGT

InterProScan

ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[1-119] 9.626
Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-171] 1.9E-15
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[2-150] 7.79E-19
Pfam	NUC153 (IPR012580) - T[295-322] 3.3E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NOL10_HUMAN	44.767 %	432	3.3E-145