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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA123YA13' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S104.g03277.02.t

Possible name(s)

BUB3; NOL10; WDR5

Gene model

Phmamm.CG.MTP2014.S104.g03277

Location

S104 [169,389 / 178,038]

Sequences

Amino acid sequence

Length: 669

>Phmamm.CG.MTP2014.S104.g03277.02.p
GLRRRIELIQDFDMPTVSSNVKMSPDGQYIFTAGTYKPRVKCYDVNHLSMKFERCFDAEV
VALDVLSQDYSKLVFLLNDRTVEFHTQQGKHYNVRIPKFGRAMAYHPSNCDLMLVGSGSE
IYRLNLDQGRFLKSYETQSPELHCCVINPDHHLVVVGGSDGHVECWDPRSRCRAGIMQTA
AHVQDFVDDNSSAMVTALKFNGALNLAVGTSSGQVLLYDMRNNRPFVIKDHRYDLPIHSI
AFNNENNFVISSDARCVKLWQERTGEAVTAVEMEKDINEMCLIDNSGLFFLANESPKLHT
YFIPMLGPAPRWCSFLDSLTEEMEENPVHEIYDDYKFLTQKDVESLGLSNLIGTSLLRAY
MHGYFVDMRLYHKAAMIANPFAFKEYRNQKIAEKIEEGRMKRVQIKKLPKVNKQLAERLL
SRAEDQDLTSGKKKKMKREAASLLDDPRFKSMFEDSSFQVDQESEEFRLLNPVVSKQFEK
QRSNERKESSLVEATSDNENGSHSGVSSSENEEEERKWVKESKKAHRNVHNKTAAARERR
RAEDAETTIAPRMFEIKGDEAIDGQRFSTLDDLEKFGSEEIQLARKRKASATLGERIDEA
ERHMSVKTHKGPGFQMGAKQATFRVEKVDAKQKQRTEEEKRHRDERRSVRRPANKLKRVK
GGRDSFFKR

Nucleotide sequence

Length: 2,203

>Phmamm.CG.MTP2014.S104.g03277.02.t
AGGGACTTAGACGAAGAATTGAACTTATTCAAGATTTTGACATGCCAACTGTCAGCTCTA
ATGTGAAAATGTCTCCAGATGGACAATATATTTTTACAGCAGGTACATATAAACCCAGGG
TGAAGTGTTACGATGTCAATCATTTATCAATGAAATTTGAAAGATGCTTTGATGCCGAAG
TGGTTGCATTGGATGTGCTGTCCCAAGATTATTCAAAGCTTGTCTTTCTGTTAAATGATC
GAACAGTTGAGTTTCACACTCAGCAAGGAAAACATTACAATGTCCGGATTCCCAAATTCG
GCCGAGCAATGGCGTATCACCCATCGAACTGCGACCTAATGCTTGTTGGCTCTGGGTCAG
AAATATATCGTTTGAATCTTGATCAAGGTCGATTTTTGAAGTCCTATGAAACACAGTCAC
CTGAGCTGCACTGTTGCGTTATTAACCCTGATCACCATCTAGTGGTGGTTGGGGGCAGCG
ACGGCCATGTTGAGTGTTGGGATCCTCGGTCGCGATGCAGAGCTGGTATAATGCAAACTG
CTGCGCATGTTCAAGATTTTGTAGATGACAATTCTTCTGCAATGGTAACTGCTTTAAAAT
TCAATGGAGCTTTAAATTTGGCTGTGGGCACTAGTTCTGGACAAGTGCTGCTATATGATA
TGAGAAACAATCGACCATTTGTAATCAAGGACCATCGCTATGACTTACCGATTCACTCGA
TAGCATTTAACAATGAAAACAACTTCGTAATTTCATCAGATGCTCGCTGTGTTAAGTTGT
GGCAGGAAAGAACTGGTGAAGCTGTAACTGCTGTTGAAATGGAAAAAGACATCAATGAAA
TGTGTCTGATTGACAATTCTGGACTCTTCTTTCTCGCAAATGAAAGCCCCAAGCTTCACA
CTTATTTTATACCAATGCTGGGTCCAGCCCCCAGATGGTGTTCTTTCCTTGACAGTTTGA
CGGAAGAAATGGAAGAAAATCCAGTGCATGAAATATATGATGATTACAAGTTTCTCACCC
AGAAGGACGTGGAGTCACTTGGTTTGTCGAATTTGATTGGTACTTCGTTGCTACGTGCTT
ACATGCATGGTTACTTCGTTGATATGAGACTCTACCACAAGGCAGCAATGATTGCAAATC
CGTTTGCGTTCAAAGAATATCGCAACCAAAAGATTGCTGAGAAAATTGAGGAGGGTCGAA
TGAAGCGAGTTCAAATCAAGAAATTGCCGAAAGTCAACAAGCAGTTGGCCGAGAGATTAT
TGAGTCGAGCCGAGGACCAAGATTTGACGAGTGGAAAGAAAAAGAAAATGAAGAGAGAAG
CAGCAAGTTTATTGGATGATCCACGTTTCAAGTCAATGTTTGAAGACAGCAGTTTCCAAG
TTGACCAGGAATCTGAAGAATTCAGATTACTTAACCCTGTTGTGTCGAAACAATTCGAAA
AGCAAAGATCCAATGAGCGCAAGGAATCATCCCTTGTCGAGGCAACAAGCGACAATGAAA
ACGGATCGCACTCTGGTGTTTCGTCATCTGAAAACGAGGAAGAAGAGAGAAAGTGGGTGA
AGGAATCAAAAAAGGCGCATAGAAATGTTCACAATAAAACCGCAGCAGCTCGCGAGCGAC
GTCGTGCGGAAGATGCTGAAACGACGATTGCACCGCGAATGTTTGAGATCAAAGGAGACG
AGGCCATCGATGGGCAAAGGTTTTCTACCTTGGATGACCTTGAGAAGTTCGGTAGCGAGG
AAATACAACTTGCACGAAAAAGAAAAGCAAGCGCGACCCTTGGCGAGCGGATTGATGAAG
CGGAACGGCATATGAGCGTGAAAACTCACAAGGGACCAGGATTTCAAATGGGAGCAAAAC
AAGCGACGTTTCGCGTAGAAAAGGTGGACGCGAAACAGAAACAGCGGACCGAGGAAGAAA
AACGTCACAGAGATGAAAGACGCTCCGTGCGTCGGCCGGCCAATAAACTGAAGCGGGTGA
AAGGGGGACGAGATTCCTTCTTTAAGCGGTGAATTGTTTGTTAAACACACGTTGGCGCTG
CAGAGCAAGTCAATGGTCGGAAAATCGAAGAGATAGAGGAAACCTACGGTGCGGATTGGA
TGTTGCAGAAACAATTGGAATGAAATTGGAAGTGGTGATGATTTGATACTTAGTGTTCCA
TCTAAAACGAAAAGTGGTCATTCAATTGCTATTGTTTCCATAG

InterProScan

SMART
WD40_repeat (IPR001680) - T[5-44] 380.0 - T[128-167] 0.0033 - T[179-219] 21.0 - T[221-261] 2.5
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[7-299] 4.88E-33
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-184] 4.1E-14 - T[185-281] 2.3E-9
Pfam
WD40_repeat (IPR001680) - T[130-167] 0.0043
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[135-270] 9.942
Pfam
NUC153 (IPR012580) - T[446-473] 4.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOL10_HUMAN 48.276 % 636 0