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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA123YA13' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S104.g03277.01.t

Possible name(s)

BUB3; NOL10; WDR5

Gene model

Phmamm.CG.MTP2014.S104.g03277

Location

S104 [168,750 / 177,078]

Sequences

Amino acid sequence

Length: 669

>Phmamm.CG.MTP2014.S104.g03277.01.p
MQVSNANNIKIYNLSSGKSLPEFISDQKRRALLKKDEGLRRRIELIQDFDMPTVSSNVKM
SPDGQYIFTAGTYKPRVKCYDVNHLSMKFERCFDAEVVALDVLSQDYSKLVFLLNDRTVE
FHTQQGKHYNVRIPKFGRAMAYHPSNCDLMLVGSGSEIYRLNLDQGRFLKSYETQSPELH
CCVINPDHHLVVVGGSDGHVECWDPRSRCRAGIMQTAAHVQDFVDDNSSAMVTALKFNGA
LNLAVGTSSGQVLLYDMRNNRPFVIKDHRYDLPIHSIAFNNENNFVISSDARCVKLWQER
TGEAVTAVEMEKDINEMCLIDNSGLFFLANESPKLHTYFIPMLGPAPRWCSFLDSLTEEM
EENPVHEIYDDYKFLTQKDVESLGLSNLIGTSLLRAYMHGYFVDMRLYHKAAMIANPFAF
KEYRNQKIAEKIEEGRMKRVQIKKLPKVNKQLAERLLSRAEDQDLTSGKKKKMKREAASL
LDDPRFKSMFEDSSFQVDQESEEFRLLNPVVSKQFEKQRSNERKESSLVEATSDNENGSH
SGVSSSENEEEERKWVKESKKAHRNVHNKTAAARERRRAEDAETTIAPRMFEIKGDEAID
GQRFSTLDDLEKFGSEEIQLARKRKASATLGERIDEAERHMSVKTHKGPGFQMGAKQATF
RVEKVSRSI

Nucleotide sequence

Length: 2,010

>Phmamm.CG.MTP2014.S104.g03277.01.t
ATGCAAGTATCCAACGCGAACAACATTAAAATTTACAATCTTAGCAGCGGAAAATCGCTA
CCCGAATTCATAAGTGACCAGAAAAGACGAGCACTGCTGAAAAAGGATGAGGGACTTAGA
CGAAGAATTGAACTTATTCAAGATTTTGACATGCCAACTGTCAGCTCTAATGTGAAAATG
TCTCCAGATGGACAATATATTTTTACAGCAGGTACATATAAACCCAGGGTGAAGTGTTAC
GATGTCAATCATTTATCAATGAAATTTGAAAGATGCTTTGATGCCGAAGTGGTTGCATTG
GATGTGCTGTCCCAAGATTATTCAAAGCTTGTCTTTCTGTTAAATGATCGAACAGTTGAG
TTTCACACTCAGCAAGGAAAACATTACAATGTCCGGATTCCCAAATTCGGCCGAGCAATG
GCGTATCACCCATCGAACTGCGACCTAATGCTTGTTGGCTCTGGGTCAGAAATATATCGT
TTGAATCTTGATCAAGGTCGATTTTTGAAGTCCTATGAAACACAGTCACCTGAGCTGCAC
TGTTGCGTTATTAACCCTGATCACCATCTAGTGGTGGTTGGGGGCAGCGACGGCCATGTT
GAGTGTTGGGATCCTCGGTCGCGATGCAGAGCTGGTATAATGCAAACTGCTGCGCATGTT
CAAGATTTTGTAGATGACAATTCTTCTGCAATGGTAACTGCTTTAAAATTCAATGGAGCT
TTAAATTTGGCTGTGGGCACTAGTTCTGGACAAGTGCTGCTATATGATATGAGAAACAAT
CGACCATTTGTAATCAAGGACCATCGCTATGACTTACCGATTCACTCGATAGCATTTAAC
AATGAAAACAACTTCGTAATTTCATCAGATGCTCGCTGTGTTAAGTTGTGGCAGGAAAGA
ACTGGTGAAGCTGTAACTGCTGTTGAAATGGAAAAAGACATCAATGAAATGTGTCTGATT
GACAATTCTGGACTCTTCTTTCTCGCAAATGAAAGCCCCAAGCTTCACACTTATTTTATA
CCAATGCTGGGTCCAGCCCCCAGATGGTGTTCTTTCCTTGACAGTTTGACGGAAGAAATG
GAAGAAAATCCAGTGCATGAAATATATGATGATTACAAGTTTCTCACCCAGAAGGACGTG
GAGTCACTTGGTTTGTCGAATTTGATTGGTACTTCGTTGCTACGTGCTTACATGCATGGT
TACTTCGTTGATATGAGACTCTACCACAAGGCAGCAATGATTGCAAATCCGTTTGCGTTC
AAAGAATATCGCAACCAAAAGATTGCTGAGAAAATTGAGGAGGGTCGAATGAAGCGAGTT
CAAATCAAGAAATTGCCGAAAGTCAACAAGCAGTTGGCCGAGAGATTATTGAGTCGAGCC
GAGGACCAAGATTTGACGAGTGGAAAGAAAAAGAAAATGAAGAGAGAAGCAGCAAGTTTA
TTGGATGATCCACGTTTCAAGTCAATGTTTGAAGACAGCAGTTTCCAAGTTGACCAGGAA
TCTGAAGAATTCAGATTACTTAACCCTGTTGTGTCGAAACAATTCGAAAAGCAAAGATCC
AATGAGCGCAAGGAATCATCCCTTGTCGAGGCAACAAGCGACAATGAAAACGGATCGCAC
TCTGGTGTTTCGTCATCTGAAAACGAGGAAGAAGAGAGAAAGTGGGTGAAGGAATCAAAA
AAGGCGCATAGAAATGTTCACAATAAAACCGCAGCAGCTCGCGAGCGACGTCGTGCGGAA
GATGCTGAAACGACGATTGCACCGCGAATGTTTGAGATCAAAGGAGACGAGGCCATCGAT
GGGCAAAGGTTTTCTACCTTGGATGACCTTGAGAAGTTCGGTAGCGAGGAAATACAACTT
GCACGAAAAAGAAAAGCAAGCGCGACCCTTGGCGAGCGGATTGATGAAGCGGAACGGCAT
ATGAGCGTGAAAACTCACAAGGGACCAGGATTTCAAATGGGAGCAAAACAAGCGACGTTT
CGCGTAGAAAAGGTCAGTAGATCAATTTAA

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-329] 1.1E-24
SMART
WD40_repeat (IPR001680) - T[42-81] 380.0 - T[165-204] 0.0033 - T[216-256] 21.0 - T[258-298] 2.5
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[42-336] 2.15E-33
Pfam
WD40_repeat (IPR001680) - T[167-204] 0.0043
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[172-307] 9.942
Pfam
NUC153 (IPR012580) - T[483-510] 4.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOL10_HUMAN 49.251 % 663 0